WormBase Tree Display for Gene: WBGene00000419
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WBGene00000419 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | ced-5 | Person_evidence | WBPerson261 | |||||
Sequence_name | C02F4.1 | ||||||||
Molecular_name | C02F4.1 | ||||||||
C02F4.1.1 | |||||||||
CE24779 | |||||||||
Other_name | CELE_C02F4.1 | Accession_evidence | NDB | BX284604 | |||||
Public_name | ced-5 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ced | ||||||||
Allele (106) | |||||||||
Legacy_information | [C.elegansII] n1812 : programmmed cell deaths abnormal, dying cells arrest at highly refractile stage; killer cells fail to engulf target cells; engulfment group B (ced-2,5,10 : suppress vulvaless phenotype of lin-24, lin-33); Mig, hermaphrodite distal tip cells execute extra turns; extensive maternal rescue; no gross phenotype. OA1: n2002.Cloned : 5.6 kb transcript, predicted protein 180 kD, novel.[Ellis et al. 1991; MT; NF; ZB] | ||||||||
[C.elegansII] n1812 : programmmed cell deaths abnormal, dying cells arrest at highly refractile stage; killer cells fail to engulf target cells; engulfment group B (ced-2,5,10 : suppress vulvaless phenotype of lin-24, lin-33); Mig, hermaphrodite distal tip cells execute extra turns; extensive maternal rescue; no gross phenotype. OA1: n2002.Cloned : 5.6 kb transcript, predicted protein 180 kD, novel. [Ellis et al. 1991; MT; NF; ZB] | |||||||||
[Wu Y-C, Horvitz HR] Encodes 1781 aa predicted protein with similarity to human protein DOCK180. n1812 is stop at codon 28, n2002, n2691 also nonsense mutations, m2098, n2099 are splice acceptor mutations. n1812/sDf2 resemble n1812/n1812, probable null phenotype. Predicted gene C02F4.1 | |||||||||
Strain | WBStrain00027132 | ||||||||
WBStrain00027134 | |||||||||
WBStrain00027167 | |||||||||
WBStrain00027174 | |||||||||
WBStrain00027281 | |||||||||
WBStrain00027282 | |||||||||
WBStrain00027293 | |||||||||
WBStrain00027342 | |||||||||
WBStrain00031450 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (48) | |||||||||
Ortholog (59) | |||||||||
Paralog | WBGene00009065 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00018520 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description (2) | |||||||||
Disease_info | Potential_model | DOID:0111951 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2988) | ||||
DOID:1094 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2989) | ||||||
Molecular_info | Corresponding_CDS | C02F4.1 | |||||||
Corresponding_transcript | C02F4.1.1 | ||||||||
Other_sequence (13) | |||||||||
Associated_feature | WBsf646307 | ||||||||
WBsf660584 | |||||||||
WBsf976954 | |||||||||
WBsf976955 | |||||||||
WBsf976956 | |||||||||
WBsf228996 | |||||||||
WBsf228997 | |||||||||
WBsf228998 | |||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern | Expr8762 | ||||||||
Expr14253 | |||||||||
Expr1020545 | |||||||||
Expr1030235 | |||||||||
Expr1143552 | |||||||||
Expr2009849 | |||||||||
Expr2028089 | |||||||||
Drives_construct | WBCnstr00005770 | ||||||||
WBCnstr00037557 | |||||||||
WBCnstr00040684 | |||||||||
Construct_product | WBCnstr00014899 | ||||||||
WBCnstr00037557 | |||||||||
Microarray_results (24) | |||||||||
Expression_cluster (132) | |||||||||
Interaction (129) | |||||||||
WBProcess | WBbiopr:00000013 | ||||||||
WBbiopr:00000014 | |||||||||
WBbiopr:00000015 | |||||||||
WBbiopr:00000023 | |||||||||
WBbiopr:00000107 | |||||||||
Map_info | Map | IV | Position | 4.61067 | Error | 0.002681 | |||
Well_ordered | |||||||||
Positive | Positive_clone | C02F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
ZK188 | |||||||||
Mapping_data | Multi_point | 1517 | |||||||
1518 | |||||||||
1520 | |||||||||
1521 | |||||||||
1522 | |||||||||
1523 | |||||||||
1820 | |||||||||
1822 | |||||||||
4720 | |||||||||
Pos_neg_data | 4243 | ||||||||
Reference (191) | |||||||||
Method | Gene |