WormBase Tree Display for Gene: WBGene00000365

WBGene00000365 SMap: S_parent: Sequence: cb25.fpc4044b2
  Identity: Version: 4
    Name: Sequence_name: CBG16767
      Molecular_name: CBG16767
        CBG16767.1
        CBP10328
      Other_name: Cb-vit-1
        G45D06s1.3
        CBG_16767 Accession_evidence: NDB HE600942
      Public_name: CBG16767
    DB_info: Database: NDB locus_tag CBG_16767
    Species: Caenorhabditis briggsae
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 13 Sep 2004 15:06:02 WBPerson1971 Event: Acquires_merge: WBGene00036617
              Name_change: Sequence_name: G45D06s1.3 -> CBG16767
                Other_name: G45D06s1.3
        3 22 Feb 2008 16:26:52 WBPerson2970 Name_change: CGC_name: Cbr-vit-1
        4 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
      Acquires_merge: WBGene00036617
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 644.077 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        755.973 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        787.28 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        836.563 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        673.283 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        730.281 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        735.301 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.00538 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.01076 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.003587 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0.041258 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.082516 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.033621 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.056383 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.058145 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.118206 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 0.011298 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.013638 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0.020881 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        0.022597 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
        0.031956 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
      WBls:0000027 0.009297 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.027891 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        0.006973 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 0 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.040183 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.078228 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        0.089089 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.09995 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0.173791 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        0.476803 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 1130.19 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        1192.71 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        14.4046 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        1459.23 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        1788.28 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        1837.96 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        10.5032 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        1.81474 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        572.297 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        797.192 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        759.639 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        922.599 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        942.011 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        961.962 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        971.625 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        543.724 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        723.654 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        932.305 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
      WBls:0000101 0.078228 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        373.718 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.080372 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        317.562 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00107225
      00107226
    Ortholog (42)
    Paralog: WBGene00035047 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00024796 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034777 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00034800 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Is an ortholog of C. elegans vit-1 and vit-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG16767
    Corresponding_CDS_history: CBG16767:bp194
    Corresponding_transcript: CBG16767.1
    Other_sequence (212)
  Experimental_info: Microarray_results: GPL8303_CB6_WBGene00000365_A
      GPL8303_CB6_WBGene00000365_B
    Expression_cluster: WBPaper00051425:CB_L1_vs_embryo_downregulated
      WBPaper00051425:CB_L4_vs_embryo_downregulated
  Remark: [180319 gw3] The CGC name Cbr-vit-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
  Method: Gene