WormBase Tree Display for Gene: WBGene00000269
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| WBGene00000269 | Evidence | Paper_evidence | WBPaper00006229 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y73E7A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | bre-4 | Person_evidence | WBPerson26 | |||||
| Sequence_name | Y73E7A.7 | ||||||||
| Molecular_name | Y73E7A.7a | ||||||||
| Y73E7A.7a.1 | |||||||||
| CE26412 | |||||||||
| Y73E7A.7b | |||||||||
| CE49566 | |||||||||
| Y73E7A.7a.2 | |||||||||
| Y73E7A.7b.1 | |||||||||
| Other_name | CELE_Y73E7A.7 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | bre-4 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bre | ||||||||
| Allele (256) | |||||||||
| Legacy_information | [Marroquin LD, Aroian RV ] Resistant to Bt toxin, Cry5B | ||||||||
| Strain | WBStrain00033007 | ||||||||
| WBStrain00008568 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Ortholog (56) | |||||||||
| Paralog | WBGene00005021 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012206 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | bre-4 encodes a beta-1,4-N-acetylgalactosaminyltransferase that is required for the toxicity of Bacillus thuringiensis Cry5B. | Paper_evidence | WBPaper00004264 | |||||
| WBPaper00016853 | |||||||||
| WBPaper00005471 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 29 Nov 2011 00:00:00 | ||||||||
| Automated_description | Enables beta-1,4-N-acetylgalactosaminyltransferase activity. Involved in positive regulation of Notch signaling pathway; protein glycosylation; and response to toxic substance. Predicted to be located in Golgi apparatus. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IId and multiple sclerosis. Is an ortholog of human B4GALT1 (beta-1,4-galactosyltransferase 1) and B4GALT3 (beta-1,4-galactosyltransferase 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070256 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:924) | ||||
| DOID:2377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:928) | ||||||
| DOID:5212 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:924) | ||||||
| Molecular_info | Corresponding_CDS | Y73E7A.7a | |||||||
| Y73E7A.7b | |||||||||
| Corresponding_transcript | Y73E7A.7a.1 | ||||||||
| Y73E7A.7a.2 | |||||||||
| Y73E7A.7b.1 | |||||||||
| Other_sequence (80) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058368 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1023430 | ||||||||
| Expr1030174 | |||||||||
| Expr1161788 | |||||||||
| Expr2009654 | |||||||||
| Expr2027893 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (66) | |||||||||
| Interaction | WBInteraction000136535 | ||||||||
| WBInteraction000136538 | |||||||||
| WBInteraction000169483 | |||||||||
| WBInteraction000169747 | |||||||||
| WBProcess | WBbiopr:00000008 | ||||||||
| Map_info | Map | I | Position | -13.6349 | Error | 0.056752 | |||
| Positive | Positive_clone | Y73E7A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | 2_point | 7119 | |||||||
| Multi_point | 3918 | ||||||||
| 5373 | |||||||||
| Reference (17) | |||||||||
| Remark | Data extracted from Marroquin et al. (2000) | ||||||||
| Method | Gene |
