WormBase Tree Display for Gene: WBGene00000177
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| WBGene00000177 | SMap | S_parent | Sequence | K07A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | aqp-9 | Person_evidence | WBPerson300 | |||||
| Sequence_name | K07A1.16 | ||||||||
| Molecular_name | K07A1.16a | ||||||||
| K07A1.16a.1 | |||||||||
| CE41143 | |||||||||
| K07A1.16b | |||||||||
| CE45660 | |||||||||
| K07A1.16a.2 | |||||||||
| K07A1.16b.1 | |||||||||
| Other_name | CELE_K07A1.16 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | aqp-9 | ||||||||
| DB_info | Database | AceView | gene | 1K183 | |||||
| WormFlux | gene | WBGene00000177 | |||||||
| NDB | locus_tag | CELE_K07A1.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000177|UniProtKB=Q7JL16 | |||||||
| family | PTHR21191 | ||||||||
| NCBI | gene | 3565336 | |||||||
| RefSeq | protein | NM_001264219.3 | |||||||
| NM_001264220.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF320251 | |||||||
| TrEMBL | UniProtAcc | E5QCH4 | |||||||
| Q7JL16 | |||||||||
| UniProt_GCRP | UniProtAcc | Q7JL16 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aqp | ||||||||
| Allele (35) | |||||||||
| Strain | WBStrain00032599 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00008278 | ||||||||
| 00008279 | |||||||||
| 00008280 | |||||||||
| 00008281 | |||||||||
| 00008282 | |||||||||
| 00082166 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00000178 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000179 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | aqp-9 encodes a putative aquaporin with no function in mass RNAi assays, perhaps reflecting genetic redundancy with its paralogs AQP-10 and AQP-11; AQP-9 is orthologous to Drosophila CG12251 and human AQP11 (OMIM:609914), AQP12A (OMIM:609789), and AQP12B. | Paper_evidence | WBPaper00029039 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 12 Aug 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable channel activity. Predicted to be involved in transmembrane transport. Predicted to be located in cytoplasm. Is an ortholog of human AQP11 (aquaporin 11). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K07A1.16a | |||||||
| K07A1.16b | |||||||||
| Corresponding_CDS_history | K07A1.16:wp176 | ||||||||
| Corresponding_transcript | K07A1.16a.1 | ||||||||
| K07A1.16a.2 | |||||||||
| K07A1.16b.1 | |||||||||
| Other_sequence | SS01753 | ||||||||
| CBC01351_1 | |||||||||
| BMC02083_1 | |||||||||
| JO469728.1 | |||||||||
| SSC04673_1 | |||||||||
| Dviv_isotig25250 | |||||||||
| JI177391.1 | |||||||||
| Oden_isotig24727 | |||||||||
| GE637924.1 | |||||||||
| Associated_feature | WBsf656771 | ||||||||
| WBsf218302 | |||||||||
| Experimental_info | Expr_pattern | Expr1026109 | |||||||
| Expr1030101 | |||||||||
| Expr1153786 | |||||||||
| Expr2009386 | |||||||||
| Expr2027622 | |||||||||
| Drives_construct | WBCnstr00037684 | ||||||||
| Construct_product | WBCnstr00037684 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (59) | |||||||||
| Map_info | Map | I | Position | 3.80624 | Error | 0.000384 | |||
| Positive | Positive_clone | K07A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
