WormBase Tree Display for Gene: WBGene00000031
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| WBGene00000031 | SMap | S_parent | Sequence | C03A7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | abu-8 | Person_evidence | WBPerson530 | |||||
| Sequence_name | C03A7.14 | ||||||||
| Molecular_name | C03A7.14 | ||||||||
| C03A7.14.1 | |||||||||
| CE07872 | |||||||||
| Other_name | pqn-4 | CGC_data_submission | |||||||
| CELE_C03A7.14 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | abu-8 | ||||||||
| DB_info | Database | AceView | gene | 5F672 | |||||
| WormQTL | gene | WBGene00000031 | |||||||
| WormFlux | gene | WBGene00000031 | |||||||
| NDB | locus_tag | CELE_C03A7.14 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000031|UniProtKB=O16511 | |||||||
| family | PTHR31895 | ||||||||
| NCBI | gene | 178904 | |||||||
| RefSeq | protein | NM_071992.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315535 | |||||||
| TrEMBL | UniProtAcc | O16511 | |||||||
| UniProt_GCRP | UniProtAcc | O16511 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:19 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | abu | ||||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00028207 | ||||||||
| 00028208 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (30) | |||||||||
| Structured_description | Concise_description | abu-8 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-8 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum, and ABU-8 may help protect the organism from damage by improperly folded nascent protein. | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00005432 | |||||||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| WBPaper00013108 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in pharynx development. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C03A7.14 | |||||||
| Corresponding_transcript | C03A7.14.1 | ||||||||
| Other_sequence | FG620595.1 | ||||||||
| FG620576.1 | |||||||||
| FG620569.1 | |||||||||
| FG620568.1 | |||||||||
| FG620594.1 | |||||||||
| FG620560.1 | |||||||||
| FG620571.1 | |||||||||
| Associated_feature | WBsf652613 | ||||||||
| WBsf999944 | |||||||||
| WBsf999945 | |||||||||
| WBsf1019597 | |||||||||
| WBsf1019598 | |||||||||
| WBsf1019599 | |||||||||
| WBsf233661 | |||||||||
| Experimental_info | RNAi_result (25) | ||||||||
| Expr_pattern | Expr1018471 | ||||||||
| Expr1030012 | |||||||||
| Expr1143585 | |||||||||
| Expr2009112 | |||||||||
| Expr2027348 | |||||||||
| Drives_construct | WBCnstr00037783 | ||||||||
| Construct_product | WBCnstr00037783 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (215) | |||||||||
| Interaction (73) | |||||||||
| WBProcess | WBbiopr:00000046 | ||||||||
| WBbiopr:00000079 | |||||||||
| Map_info | Map | V | Position | -2.37753 | Error | 0.002573 | |||
| Positive | Positive_clone | C03A7 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026629 | ||||||||
| WBPaper00026929 | |||||||||
| WBPaper00031097 | |||||||||
| WBPaper00032003 | |||||||||
| WBPaper00038304 | |||||||||
| WBPaper00039120 | |||||||||
| WBPaper00045960 | |||||||||
| WBPaper00051669 | |||||||||
| WBPaper00064648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
