WormBase Tree Display for Gene: WBGene00000026
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| WBGene00000026 | SMap | S_parent | Sequence | F31A3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | CGC_name | abu-3 | Person_evidence | WBPerson530 | ||||||
| Sequence_name | F31A3.1 | |||||||||
| Molecular_name | F31A3.1 | |||||||||
| Other_name | CELE_F31A3.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | abu-3 | |||||||||
| DB_info | Database | AceView | gene | XS165 | ||||||
| WormQTL | gene | WBGene00000026 | ||||||||
| WormFlux | gene | WBGene00000026 | ||||||||
| NDB | locus_tag | CELE_F31A3.1 | ||||||||
| NCBI | gene | 185133 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:19 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 18 Feb 2016 15:20:24 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | abu | |||||||||
| Allele (24) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog (11) | ||||||||||
| Paralog (20) | ||||||||||
| Structured_description | Concise_description | abu-3 encodes a transmembrane protein with a predicted signal sequence, a glutamine/asparagine-rich domain and multiple cysteine-rich repeats (DUF139); abu-3 expression is induced by blockage of the unfolded-protein response in the endoplasmic reticulum (ER), and ABU-3 may function within the ER to protect the organism from damage by improperly folded nascent protein; abu-3 expression is enhanced in ER-stressed animals in which the unfolded protein response (UPR) is blocked by mutations in xbp-1, a bZIP transcription factor. | Paper_evidence | WBPaper00005068 | ||||||
| WBPaper00005432 | ||||||||||
| WBPaper00012788 | ||||||||||
| WBPaper00012830 | ||||||||||
| WBPaper00012882 | ||||||||||
| WBPaper00012897 | ||||||||||
| WBPaper00013003 | ||||||||||
| WBPaper00013108 | ||||||||||
| Curator_confirmed | WBPerson1843 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | |||||||||
| Automated_description | Is affected by several genes including lin-4; lin-14; and sir-2.1 based on microarray and RNA-seq studies. Is affected by resveratrol; Chlorpyrifos; and Sirolimus based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F31A3.1:wp252 | ||||||||
| Corresponding_pseudogene | F31A3.1 | |||||||||
| Experimental_info | Expr_pattern | Expr1026257 | ||||||||
| Expr1030010 | ||||||||||
| Expr1149876 | ||||||||||
| Microarray_results (12) | ||||||||||
| Expression_cluster (47) | ||||||||||
| Interaction (18) | ||||||||||
| Map_info | Map | X | Position | 24.3511 | ||||||
| Positive | Positive_clone | F31A3 | Inferred_automatically | From CDS info | ||||||
| From sequence, transcript, pseudogene data | ||||||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00026929 | |||||||||
| Remark | Sequence connection from PMID 12186849 [021008 ck1] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||||
| Method | Gene |
