WormBase Tree Display for Gene: WBGene00000457
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| WBGene00000457 | SMap | S_parent | Sequence | C37E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ceh-36 | Person_evidence | WBPerson83 | |||||
| Sequence_name | C37E2.4 | ||||||||
| Molecular_name | C37E2.4 | ||||||||
| C37E2.4.1 | |||||||||
| CE08623 | |||||||||
| Other_name | CELE_C37E2.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | ceh-36 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ceh | ||||||||
| Allele (73) | |||||||||
| Strain | WBStrain00006685 | ||||||||
| WBStrain00029360 | |||||||||
| WBStrain00029396 | |||||||||
| WBStrain00029397 | |||||||||
| WBStrain00029398 | |||||||||
| WBStrain00029399 | |||||||||
| WBStrain00029400 | |||||||||
| WBStrain00029428 | |||||||||
| WBStrain00029429 | |||||||||
| WBStrain00029430 | |||||||||
| WBStrain00029431 | |||||||||
| WBStrain00029432 | |||||||||
| WBStrain00029433 | |||||||||
| WBStrain00029434 | |||||||||
| WBStrain00029452 | |||||||||
| WBStrain00029461 | |||||||||
| WBStrain00029463 | |||||||||
| WBStrain00029464 | |||||||||
| WBStrain00029485 | |||||||||
| WBStrain00035889 | |||||||||
| WBStrain00005275 | |||||||||
| WBStrain00005276 | |||||||||
| WBStrain00007515 | |||||||||
| WBStrain00022465 | |||||||||
| WBStrain00049275 | |||||||||
| WBStrain00049307 | |||||||||
| WBStrain00050853 | |||||||||
| WBStrain00055073 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (22) | |||||||||
| Ortholog (23) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Concise_description | ceh-36 encodes a paired-like homeodomain transcription factor that is one of three orthodenticle (OTX/OTD) homeodomain proteins in C. elegans (the others being TTX-1 and CEH-37); CEH-36 is required broadly for specification of the AWC olfactory neuron and also for establishing the left-right asymmetry of the ASEL and ASER gustatory neurons; in addition, CEH-36 is sufficient to specify the AFD thermosensory neuron fate in some cell types; CEH-36 is expressed in the AWC and ASE chemosensory neurons. | Paper_evidence | WBPaper00006146 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 03 Nov 2008 00:00:00 | ||||||||
| Automated_description | Enables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Involved in neuron fate specification; positive regulation of transcription by RNA polymerase II; and sensory perception of chemical stimulus. Located in nucleus. Expressed in ABaraappa; ABaraappaa; amphid neurons; and head neurons. Human ortholog(s) of this gene implicated in primary ovarian insufficiency 5. Is an ortholog of human ARGFX (arginine-fifty homeobox); DPRX (divergent-paired related homeobox); and NOBOX (NOBOX oogenesis homeobox). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080862 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:22448) | ||||
| Molecular_info | Corresponding_CDS | C37E2.4 | |||||||
| Corresponding_transcript | C37E2.4.1 | ||||||||
| Other_sequence | Acan_isotig20892 | ||||||||
| CRC06706_1 | |||||||||
| Dviv_isotig18862 | |||||||||
| CR03746 | |||||||||
| Dviv_isotig18863 | |||||||||
| Associated_feature (13) | |||||||||
| Gene_product_binds (3) | |||||||||
| Transcription_factor | WBTranscriptionFactor000158 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00093990 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001118 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029642 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011721 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042116 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (23) | |||||||||
| Drives_construct (46) | |||||||||
| Construct_product | WBCnstr00007677 | ||||||||
| WBCnstr00010927 | |||||||||
| WBCnstr00011003 | |||||||||
| WBCnstr00018896 | |||||||||
| WBCnstr00022542 | |||||||||
| WBCnstr00022977 | |||||||||
| WBCnstr00037522 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (115) | |||||||||
| Interaction (126) | |||||||||
| Anatomy_function | WBbtf0392 | ||||||||
| Map_info | Map | X | Position | 16.6588 | Error | 0.001314 | |||
| Positive | Positive_clone | C37E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4209 | |||||||
| Pseudo_map_position | |||||||||
| Reference (87) | |||||||||
| Remark | [Burglin T] registered gene name | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
