WormBase Tree Display for Gene: WBGene00016374
expand all nodes | collapse all nodes | view schema
| WBGene00016374 | SMap | S_parent | Sequence | C33H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | swd-2.2 | Person_evidence | WBPerson5509 | |||||
| Sequence_name | C33H5.7 | ||||||||
| Molecular_name | C33H5.7 | ||||||||
| C33H5.7.1 | |||||||||
| CE04150 | |||||||||
| Other_name | CELE_C33H5.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | swd-2.2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Nov 2008 17:10:59 | WBPerson2970 | Name_change | CGC_name | swd-2.2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | swd | ||||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061062 | ||||||||
| 00061063 | |||||||||
| 00061064 | |||||||||
| 00061065 | |||||||||
| 00061066 | |||||||||
| 00061067 | |||||||||
| 00061068 | |||||||||
| Contained_in_operon | CEOP4248 | ||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00016373 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable chromatin binding activity. Involved in programmed cell death. Predicted to be located in nucleus. Predicted to be part of Set1C/COMPASS complex. Expressed in linker cell. Is an ortholog of human WDR82 (WD repeat domain 82). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C33H5.7 | |||||||
| Corresponding_transcript | C33H5.7.1 | ||||||||
| Other_sequence (36) | |||||||||
| Associated_feature | WBsf646115 | ||||||||
| WBsf228577 | |||||||||
| WBsf228578 | |||||||||
| WBsf228579 | |||||||||
| Experimental_info | RNAi_result (19) | ||||||||
| Expr_pattern | Expr13017 | ||||||||
| Expr1013219 | |||||||||
| Expr1037009 | |||||||||
| Expr1145833 | |||||||||
| Expr2017151 | |||||||||
| Expr2035287 | |||||||||
| Drives_construct | WBCnstr00028122 | ||||||||
| WBCnstr00038154 | |||||||||
| Construct_product | WBCnstr00028122 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (67) | |||||||||
| Map_info | Map | IV | Position | 3.47343 | Error | 0.000492 | |||
| Positive | Positive_clone | C33H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031805 | ||||||||
| WBPaper00032309 | |||||||||
| WBPaper00036892 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00038821 | |||||||||
| WBPaper00039503 | |||||||||
| WBPaper00040306 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059048 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
