WormBase Tree Display for Gene: WBGene00006915
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| WBGene00006915 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | vha-6 | |||||||
| Sequence_name | VW02B12L.1 | ||||||||
| Molecular_name | VW02B12L.1 | ||||||||
| VW02B12L.1.1 | |||||||||
| CE18980 | |||||||||
| Other_name | CELE_VW02B12L.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | vha-6 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | vha | ||||||||
| Allele (54) | |||||||||
| Legacy_information | [Pujol N] vha-6 is expressed only in the intestine, from the embryonic coma stage through larvae and adult | ||||||||
| Strain | WBStrain00036524 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (58) | |||||||||
| Paralog | WBGene00006768 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00006914 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006916 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:0070390 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:865) | ||||
| DOID:0110942 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11647) | ||||||
| DOID:14219 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:866) | ||||||
| DOID:0112171 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18481) | ||||||
| EFO:MONDO:0015827 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:866) | ||||||
| DOID:0070134 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18481) | ||||||
| Molecular_info | Corresponding_CDS | VW02B12L.1 | |||||||
| Corresponding_transcript | VW02B12L.1.1 | ||||||||
| Other_sequence (71) | |||||||||
| Associated_feature | WBsf650573 | ||||||||
| WBsf650574 | |||||||||
| WBsf989758 | |||||||||
| WBsf1013237 | |||||||||
| WBsf223933 | |||||||||
| Experimental_info | RNAi_result (55) | ||||||||
| Expr_pattern | Expr851 | ||||||||
| Expr2404 | |||||||||
| Expr2407 | |||||||||
| Expr13465 | |||||||||
| Expr1029215 | |||||||||
| Expr1032932 | |||||||||
| Expr1158019 | |||||||||
| Expr2017992 | |||||||||
| Expr2036128 | |||||||||
| Drives_construct (205) | |||||||||
| Construct_product | WBCnstr00013297 | ||||||||
| WBCnstr00016253 | |||||||||
| WBCnstr00038389 | |||||||||
| Antibody | WBAntibody00000406 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (230) | |||||||||
| Interaction (123) | |||||||||
| Map_info | Map | II | Position | 3.46558 | Error | 0.000297 | |||
| Positive | Positive_clone | VW02B12L | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004842 | ||||||||
| WBPaper00005295 | |||||||||
| WBPaper00005567 | |||||||||
| WBPaper00010347 | |||||||||
| WBPaper00029254 | |||||||||
| WBPaper00034480 | |||||||||
| WBPaper00035048 | |||||||||
| WBPaper00035182 | |||||||||
| WBPaper00036098 | |||||||||
| WBPaper00036578 | |||||||||
| WBPaper00036659 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00046899 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057684 | |||||||||
| WBPaper00058161 | |||||||||
| WBPaper00058835 | |||||||||
| WBPaper00058870 | |||||||||
| WBPaper00059755 | |||||||||
| WBPaper00061730 | |||||||||
| WBPaper00062454 | |||||||||
| WBPaper00064023 | |||||||||
| WBPaper00064130 | |||||||||
| WBPaper00064187 | |||||||||
| WBPaper00064204 | |||||||||
| WBPaper00064229 | |||||||||
| WBPaper00064708 | |||||||||
| WBPaper00064933 | |||||||||
| Remark | Sequence From: Pujol Nathalie via ACEDB feedback page <pujol@lgpd.univ-mrs.fr> | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
