WormBase Tree Display for Gene: WBGene00004344
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| WBGene00004344 | SMap | S_parent | Sequence | C05B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rgs-1 | Person_evidence | WBPerson330 | |||||
| Sequence_name | C05B5.7 | ||||||||
| Molecular_name | C05B5.7a | ||||||||
| C05B5.7a.1 | |||||||||
| CE27794 | |||||||||
| C05B5.7b | |||||||||
| CE44351 | |||||||||
| C05B5.7a.2 | |||||||||
| C05B5.7b.1 | |||||||||
| Other_name | CELE_C05B5.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | rgs-1 | ||||||||
| DB_info | Database | AceView | gene | 3L104 | |||||
| WormQTL | gene | WBGene00004344 | |||||||
| WormFlux | gene | WBGene00004344 | |||||||
| NDB | locus_tag | CELE_C05B5.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004344|UniProtKB=P34295 | |||||||
| family | PTHR10845 | ||||||||
| NCBI | gene | 176415 | |||||||
| RefSeq | protein | NM_001268127.3 | |||||||
| NM_001382973.1 | |||||||||
| SwissProt | UniProtAcc | P34295 | |||||||
| TrEMBL | UniProtAcc | D1MN65 | |||||||
| UniProt_GCRP | UniProtAcc | P34295 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rgs | ||||||||
| Allele (51) | |||||||||
| Strain | WBStrain00002110 | ||||||||
| WBStrain00002015 | |||||||||
| WBStrain00026359 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00007268 | ||||||||
| 00041408 | |||||||||
| 00041409 | |||||||||
| 00041410 | |||||||||
| 00041411 | |||||||||
| 00041412 | |||||||||
| 00041413 | |||||||||
| 00041414 | |||||||||
| Ortholog (40) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Concise_description | rgs-1 encodes a regulator of G protein signaling; by homology, RGS-1 is predicted to function as a GTPase-activating protein for heterotrimeric G-protein alpha-subunits, and in vitro RGS-1 can stimulate the GTPase activity of purified GOA-1; in vivo, rgs-1 appears to function redundantly with rgs-2 to regulate egg-laying behavior when animals are refed following starvation; rgs-1 is expressed in most or all neurons. | Paper_evidence | WBPaper00004281 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables GTPase activator activity. Involved in chemosensory behavior and sensory perception of bitter taste. Expressed in head; neurons; and tail. Is an ortholog of human RGS19 (regulator of G protein signaling 19). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS (2) | ||||||||
| Corresponding_CDS_history | C05B5.7:wp52 | ||||||||
| Corresponding_transcript | C05B5.7a.1 | ||||||||
| C05B5.7a.2 | |||||||||
| C05B5.7b.1 | |||||||||
| Other_sequence | AF220159 | ||||||||
| FG347523.1 | |||||||||
| HBC08155_1 | |||||||||
| Hbac_isotig02240 | |||||||||
| DN152756.1 | |||||||||
| FG619603.1 | |||||||||
| FG619770.1 | |||||||||
| EE724204.1 | |||||||||
| JI476597.1 | |||||||||
| Associated_feature | WBsf651432 | ||||||||
| WBsf993883 | |||||||||
| WBsf993884 | |||||||||
| WBsf993885 | |||||||||
| WBsf1015718 | |||||||||
| WBsf1015719 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010174 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039692 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006271 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00002798 | ||||||||
| WBCnstr00004421 | |||||||||
| WBCnstr00004865 | |||||||||
| WBCnstr00010048 | |||||||||
| WBCnstr00020145 | |||||||||
| Construct_product | WBCnstr00004865 | ||||||||
| WBCnstr00010048 | |||||||||
| Antibody | WBAntibody00001585 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | III | Position | 1.53481 | Error | 0.012126 | |||
| Positive | Positive_clone | C05B5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4633 | |||||||
| 5300 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004281 | ||||||||
| WBPaper00004502 | |||||||||
| WBPaper00005615 | |||||||||
| WBPaper00010551 | |||||||||
| WBPaper00011223 | |||||||||
| WBPaper00011274 | |||||||||
| WBPaper00022450 | |||||||||
| WBPaper00023092 | |||||||||
| WBPaper00025141 | |||||||||
| WBPaper00029025 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00051027 | |||||||||
| WBPaper00051547 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
