WormBase Tree Display for Gene: WBGene00003939
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| WBGene00003939 | Evidence | Person_evidence | WBPerson96 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_II | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | pax-3 | Person_evidence | WBPerson96 | |||||
| Sequence_name | F27E5.2 | ||||||||
| Molecular_name | F27E5.2 | ||||||||
| F27E5.2.1 | |||||||||
| CE35862 | |||||||||
| Other_name | CELE_F27E5.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | pax-3 | ||||||||
| DB_info | Database | AceView | gene | 2K439 | |||||
| WormFlux | gene | WBGene00003939 | |||||||
| NDB | locus_tag | CELE_F27E5.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003939|UniProtKB=G5ED66 | |||||||
| family | PTHR45636 | ||||||||
| NCBI | gene | 185022 | |||||||
| RefSeq | protein | NM_063788.3 | |||||||
| SwissProt | UniProtAcc | G5ED66 | |||||||
| TREEFAM | TREEFAM_ID | TF351610 | |||||||
| UniProt_GCRP | UniProtAcc | G5ED66 | |||||||
| OMIM | gene | 167410 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:33 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pax | ||||||||
| Allele (109) | |||||||||
| Strain | WBStrain00028931 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (46) | |||||||||
| Paralog (22) | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:0081351 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8621) | ||||
| DOID:4051 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8621) | ||||||
| Molecular_info | Corresponding_CDS | F27E5.2 | |||||||
| Corresponding_CDS_history | F27E5.2:wp111 | ||||||||
| Corresponding_transcript | F27E5.2.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature (18) | |||||||||
| Transcription_factor | WBTranscriptionFactor000298 | ||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern (13) | |||||||||
| Drives_construct | WBCnstr00005879 | ||||||||
| WBCnstr00005880 | |||||||||
| WBCnstr00005881 | |||||||||
| WBCnstr00005882 | |||||||||
| WBCnstr00012916 | |||||||||
| WBCnstr00014228 | |||||||||
| WBCnstr00015305 | |||||||||
| WBCnstr00015306 | |||||||||
| WBCnstr00035784 | |||||||||
| Construct_product | WBCnstr00035784 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction (139) | |||||||||
| Map_info | Map | II | Position | 2.03217 | Error | 0.043029 | |||
| Positive | Positive_clone | F27E5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5093 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003599 | ||||||||
| WBPaper00015177 | |||||||||
| WBPaper00026796 | |||||||||
| WBPaper00027309 | |||||||||
| WBPaper00029334 | |||||||||
| WBPaper00030857 | |||||||||
| WBPaper00031770 | |||||||||
| WBPaper00033137 | |||||||||
| WBPaper00035946 | |||||||||
| WBPaper00036208 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039486 | |||||||||
| WBPaper00043342 | |||||||||
| WBPaper00048154 | |||||||||
| WBPaper00049356 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060123 | |||||||||
| WBPaper00061738 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
