WormBase Tree Display for Gene: WBGene00003172

WBGene00003172 SMap: S_parent: Sequence: CHROMOSOME_I
  Identity: Version: 1
    Name: CGC_name: mec-8 Person_evidence: WBPerson95
      Sequence_name: F46A9.6
      Molecular_name: F46A9.6
        F46A9.6.1
        CE08260
        F46A9.6.2
      Other_name: CELE_F46A9.6 Accession_evidence: NDB BX284601
      Public_name: mec-8
    DB_info: Database: AceView gene 1K18
        WormQTL gene WBGene00003172
        WormFlux gene WBGene00003172
        NDB locus_tag CELE_F46A9.6
        Panther gene CAEEL|WormBase=WBGene00003172|UniProtKB=G5ECJ4
          family PTHR10501
        NCBI gene 172771
        RefSeq protein NM_060107.7
        TREEFAM TREEFAM_ID TF351070
        TrEMBL UniProtAcc G5ECJ4
        UniProt_GCRP UniProtAcc G5ECJ4
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:31 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info (12)
  Molecular_info: Corresponding_CDS: F46A9.6
    Corresponding_transcript: F46A9.6.1
      F46A9.6.2
    Other_sequence (24)
    Associated_feature (31)
    Gene_product_binds: WBsf047657
      WBsf047658
  Experimental_info: RNAi_result (14)
    Expr_pattern (12)
    Drives_construct: WBCnstr00002454
      WBCnstr00006517
      WBCnstr00010759
      WBCnstr00036198
      WBCnstr00041290
      WBCnstr00042667
    Construct_product: WBCnstr00006517
      WBCnstr00010759
      WBCnstr00016049
      WBCnstr00036198
      WBCnstr00041290
      WBCnstr00042667
    Regulate_expr_cluster: WBPaper00062197:mec-8_downregulated
      WBPaper00062197:mec-8_downregulated_TRN
      WBPaper00062197:mec-8_upregulated
      WBPaper00062197:mec-8_upregulated_TRN
    Antibody: WBAntibody00000576
    Microarray_results (26)
    Expression_cluster (163)
    Interaction (185)
  Map_info: Map: I Position: 3.76436 Error: 0.0003
    Well_ordered
    Positive: Positive_clone: C17E4
        C34A2
        F46A9 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 27
        5741
      Multi_point (14)
      Pos_neg_data (18)
  Reference: WBPaper00000427
    WBPaper00000502
    WBPaper00000608
    WBPaper00000932
    WBPaper00001125
    WBPaper00001296
    WBPaper00001364
    WBPaper00001557
    WBPaper00001704
    WBPaper00001871
    WBPaper00001894
    WBPaper00002016
    WBPaper00002087
    WBPaper00002362
    WBPaper00002458
    WBPaper00002482
    WBPaper00002721
    WBPaper00002737
    WBPaper00003408
    WBPaper00003663
    WBPaper00003680
    WBPaper00003835
    WBPaper00004405
    WBPaper00004764
    WBPaper00005237
    WBPaper00005568
    WBPaper00005809
    WBPaper00006516
    WBPaper00010395
    WBPaper00010526
    WBPaper00011140
    WBPaper00011181
    WBPaper00012405
    WBPaper00012412
    WBPaper00012413
    WBPaper00012463
    WBPaper00012496
    WBPaper00012659
    WBPaper00012734
    WBPaper00013320
    WBPaper00014392
    WBPaper00014522
    WBPaper00014668
    WBPaper00014786
    WBPaper00015038
    WBPaper00015423
    WBPaper00015440
    WBPaper00015442
    WBPaper00015491
    WBPaper00015748
    WBPaper00016121
    WBPaper00017156
    WBPaper00017665
    WBPaper00017810
    WBPaper00017889
    WBPaper00018123
    WBPaper00018217
    WBPaper00018512
    WBPaper00018833
    WBPaper00019338
    WBPaper00019457
    WBPaper00019459
    WBPaper00019464
    WBPaper00019588
    WBPaper00020822
    WBPaper00022000
    WBPaper00022164
    WBPaper00022179
    WBPaper00022227
    WBPaper00022326
    WBPaper00022577
    WBPaper00022721
    WBPaper00022838
    WBPaper00023073
    WBPaper00023665
    WBPaper00023667
    WBPaper00023811
    WBPaper00024103
    WBPaper00024265
    WBPaper00024639
    WBPaper00024758
    WBPaper00026063
    WBPaper00027108
    WBPaper00027224
    WBPaper00027229
    WBPaper00027231
    WBPaper00027253
    WBPaper00027255
    WBPaper00027750
    WBPaper00029016
    WBPaper00029131
    WBPaper00030489
    WBPaper00033003
    WBPaper00035946
    WBPaper00036089
    WBPaper00038491
    WBPaper00040698
    WBPaper00041641
    WBPaper00042663
    WBPaper00042744
    WBPaper00046588
    WBPaper00047191
    WBPaper00047483
    WBPaper00048272
    WBPaper00050601
    WBPaper00052173
    WBPaper00053331
    WBPaper00055090
    WBPaper00055368
    WBPaper00057064
    WBPaper00057641
    WBPaper00057837
    WBPaper00062110
    WBPaper00062197
    WBPaper00063577
    WBPaper00064339
    WBPaper00064400
    WBPaper00064934
    WBPaper00065707
  Remark: [Lundquist EA] I'm quite certain that these polymorphisms are defects in the mec-8 gene. u456 and rh170 are small deletions of the same 2.5kb HIII fragment, u391 is a complex rearrangement that has a breakpoint in the same 2.5kb HIII fragment, and mn472 is a Tc1 insertion into the same 2.5kb HIII fragment. Furthermore, the area of these cosmids on the physical map is in good agreement with the genetic map position of mec-8. Rescue is hopefully on the way.
  Method: Gene