WormBase Tree Display for Gene: WBGene00002055
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| WBGene00002055 | SMap | S_parent | Sequence | F37B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ifc-1 | Person_evidence | WBPerson105 | |||||
| WBPerson293 | |||||||||
| Sequence_name | F37B4.2 | ||||||||
| Molecular_name | F37B4.2 | ||||||||
| F37B4.2.1 | |||||||||
| CE27378 | |||||||||
| Other_name | Cel IF C1 | Accession_evidence | EMBL | X70832 | |||||
| CelIF c1 | |||||||||
| CELE_F37B4.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | ifc-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ifc | ||||||||
| Allele (60) | |||||||||
| Strain | WBStrain00032410 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (49) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Concise_description | ifc-1 encodes a nonessential intermediate filament protein; IFC-1 is predicted to function as a structural component of the cytoskeleton; IFC-1 has no function in RNAi assays. | Paper_evidence | WBPaper00001981 | |||||
| WBPaper00004761 | |||||||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in cellular localization; heterochromatin formation; and nucleus organization. Predicted to be located in nuclear envelope and nuclear lamina. Expressed in hypodermis; intestine; and pharynx. Human ortholog(s) of this gene implicated in several diseases, including Dowling-Degos disease; ichthyosis (multiple); and palmoplantar keratosis (multiple). Is an ortholog of several human genes including KRT1 (keratin 1); KRT2 (keratin 2); and KRT3 (keratin 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (14) | ||||||||
| Molecular_info | Corresponding_CDS | F37B4.2 | |||||||
| Corresponding_transcript | F37B4.2.1 | ||||||||
| Other_sequence | CJC06704_1 | ||||||||
| CBC04609_1 | |||||||||
| CBC08053_1 | |||||||||
| CBC01028_1 | |||||||||
| Associated_feature | WBsf661170 | ||||||||
| WBsf231539 | |||||||||
| WBsf231540 | |||||||||
| WBsf231541 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00007220 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014485 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046594 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097123 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062649 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062650 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00098345 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3398 | ||||||||
| Expr15263 | |||||||||
| Expr1025855 | |||||||||
| Expr1031208 | |||||||||
| Expr1150478 | |||||||||
| Expr2012681 | |||||||||
| Expr2030917 | |||||||||
| Drives_construct | WBCnstr00011377 | ||||||||
| WBCnstr00036489 | |||||||||
| WBCnstr00042144 | |||||||||
| Construct_product | WBCnstr00011377 | ||||||||
| WBCnstr00036489 | |||||||||
| WBCnstr00042144 | |||||||||
| Antibody | WBAntibody00000796 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (267) | |||||||||
| Interaction (77) | |||||||||
| Map_info | Map | V | Position | -12.8753 | Error | 0.001266 | |||
| Positive | Positive_clone | F37B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00001981 | ||||||||
| WBPaper00004761 | |||||||||
| WBPaper00027245 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00051872 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056033 | |||||||||
| WBPaper00056896 | |||||||||
| WBPaper00057164 | |||||||||
| WBPaper00059330 | |||||||||
| WBPaper00061750 | |||||||||
| WBPaper00063976 | |||||||||
| WBPaper00065558 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
