WormBase Tree Display for Gene: WBGene00001445
expand all nodes | collapse all nodes | view schema
| WBGene00001445 | SMap | S_parent | Sequence | W07E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | flp-2 | Person_evidence | WBPerson369 | |||||
| Sequence_name | W07E11.3 | ||||||||
| Molecular_name | W07E11.3a | ||||||||
| W07E11.3a.1 | |||||||||
| CE02374 | |||||||||
| W07E11.3b | |||||||||
| CE28258 | |||||||||
| W07E11.3b.1 | |||||||||
| Other_name | flp-2a | Accession_evidence | EMBL | AF042387 | |||||
| flp-2b | Accession_evidence | EMBL | AF042388 | ||||||
| CELE_W07E11.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | flp-2 | ||||||||
| DB_info | Database | AceView | gene | XK712 | |||||
| WormQTL | gene | WBGene00001445 | |||||||
| WormFlux | gene | WBGene00001445 | |||||||
| NDB | locus_tag | CELE_W07E11.3 | |||||||
| NCBI | gene | 181222 | |||||||
| RefSeq | protein | NM_001029775.3 | |||||||
| NM_001029774.4 | |||||||||
| SwissProt | UniProtAcc | G5EFN6 | |||||||
| UniProt_GCRP | UniProtAcc | G5EFN6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | flp | ||||||||
| Allele (22) | |||||||||
| Strain | WBStrain00037360 | ||||||||
| WBStrain00037433 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00018457 | ||||||||
| 00018458 | |||||||||
| 00018459 | |||||||||
| 00018460 | |||||||||
| 00018461 | |||||||||
| 00018462 | |||||||||
| 00018463 | |||||||||
| 00018464 | |||||||||
| Ortholog (19) | |||||||||
| Structured_description | Concise_description | flp-2 encodes a predicted FMRFamide-like peptide neurotransmitter; expressed in the pharyngeal neuron I5. | Paper_evidence | WBPaper00004931 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Involved in several processes, including G protein-coupled receptor signaling pathway; positive regulation of protein secretion; and sleep. Acts upstream of with a positive effect on mitochondrial unfolded protein response. Expressed in MC neuron; interneuron; and nerve ring. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W07E11.3a | |||||||
| W07E11.3b | |||||||||
| Corresponding_transcript | W07E11.3a.1 | ||||||||
| W07E11.3b.1 | |||||||||
| Other_sequence | AF042387 | ||||||||
| AF042388 | |||||||||
| NAC02082_1 | |||||||||
| CJC15154_1 | |||||||||
| BU088173.1 | |||||||||
| Associated_feature (2) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019698 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054947 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054948 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026510 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027742 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027502 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1474 | ||||||||
| Expr2381 | |||||||||
| Expr3004 | |||||||||
| Expr10615 | |||||||||
| Expr11458 | |||||||||
| Expr1012495 | |||||||||
| Expr1158481 | |||||||||
| Expr2011841 | |||||||||
| Expr2030079 | |||||||||
| Drives_construct | WBCnstr00005136 | ||||||||
| WBCnstr00017072 | |||||||||
| WBCnstr00018859 | |||||||||
| WBCnstr00036942 | |||||||||
| Construct_product | WBCnstr00036942 | ||||||||
| Antibody | WBAntibody00000611 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (144) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | X | Position | 1.74448 | Error | 0.002175 | |||
| Positive | Positive_clone | W07E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002563 | ||||||||
| WBPaper00002755 | |||||||||
| WBPaper00003915 | |||||||||
| WBPaper00004257 | |||||||||
| WBPaper00006011 | |||||||||
| WBPaper00010904 | |||||||||
| WBPaper00011086 | |||||||||
| WBPaper00022586 | |||||||||
| WBPaper00023309 | |||||||||
| WBPaper00024196 | |||||||||
| WBPaper00024457 | |||||||||
| WBPaper00025071 | |||||||||
| WBPaper00025141 | |||||||||
| WBPaper00026832 | |||||||||
| WBPaper00028453 | |||||||||
| WBPaper00030763 | |||||||||
| WBPaper00041911 | |||||||||
| WBPaper00044852 | |||||||||
| WBPaper00046084 | |||||||||
| WBPaper00050063 | |||||||||
| WBPaper00050310 | |||||||||
| WBPaper00051632 | |||||||||
| WBPaper00053388 | |||||||||
| WBPaper00055865 | |||||||||
| WBPaper00058543 | |||||||||
| WBPaper00063029 | |||||||||
| WBPaper00063975 | |||||||||
| WBPaper00064233 | |||||||||
| WBPaper00064754 | |||||||||
| WBPaper00065376 | |||||||||
| WBPaper00065565 | |||||||||
| WBPaper00065946 | |||||||||
| WBPaper00066057 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
