WormBase Tree Display for Gene: WBGene00020109
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WBGene00020109 | SMap | S_parent | Sequence | R151 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | der-2 | Person_evidence | WBPerson2876 | |||
Sequence_name | R151.6 | ||||||
Molecular_name | R151.6 | ||||||
R151.6.1 | |||||||
CE39620 | |||||||
Other_name | CELE_R151.6 | Accession_evidence | NDB | BX284603 | |||
Public_name | der-2 | ||||||
DB_info | Database | AceView | gene | 3I312 | |||
WormQTL | gene | WBGene00020109 | |||||
WormFlux | gene | WBGene00020109 | |||||
NDB | locus_tag | CELE_R151.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020109|UniProtKB=Q21997 | |||||
family | PTHR11009 | ||||||
NCBI | gene | 176018 | |||||
RefSeq | protein | NM_001392140.1 | |||||
SwissProt | UniProtAcc | Q21997 | |||||
TREEFAM | TREEFAM_ID | TF314715 | |||||
UniProt_GCRP | UniProtAcc | Q21997 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | der | ||||||
Allele (23) | |||||||
Strain | WBStrain00052444 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (19) | |||||||
Contained_in_operon | CEOP3424 | ||||||
Ortholog (40) | |||||||
Paralog | WBGene00000843 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable misfolded protein binding activity; signal recognition particle binding activity; and ubiquitin-specific protease binding activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of Hrd1p ubiquitin ligase ERAD-L complex. Is an ortholog of human DERL2 (derlin 2). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R151.6 | |||||
Corresponding_CDS_history | R151.6:wp153 | ||||||
Corresponding_transcript | R151.6.1 | ||||||
Other_sequence (31) | |||||||
Associated_feature | WBsf226933 | ||||||
WBsf226934 | |||||||
Experimental_info | RNAi_result | WBRNAi00080960 | Inferred_automatically | RNAi_primary | |||
WBRNAi00093389 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00093391 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00108401 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051979 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027891 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00080961 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005512 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00065525 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076619 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00080959 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051978 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00108404 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00080958 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00017872 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1016417 | ||||||
Expr1038745 | |||||||
Expr1155622 | |||||||
Expr2005658 | |||||||
Expr2023874 | |||||||
Drives_construct | WBCnstr00025369 | ||||||
Construct_product | WBCnstr00025369 | ||||||
Microarray_results (20) | |||||||
Expression_cluster (65) | |||||||
Interaction (18) | |||||||
Map_info | Map | III | Position | -0.767964 | |||
Positive | Positive_clone | R151 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (11) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |