WormBase Tree Display for Gene: WBGene00015099
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WBGene00015099 | SMap | S_parent | Sequence | B0280 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ggtb | ||||||
Allele (40) | |||||||
Strain | WBStrain00001303 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Ortholog (36) | |||||||
Paralog | WBGene00006465 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00013002 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Automated_description | Predicted to enable small GTPase binding activity and zinc ion binding activity. Predicted to contribute to Rab geranylgeranyltransferase activity. Involved in PERK-mediated unfolded protein response. Predicted to be part of Rab-protein geranylgeranyltransferase complex. Expressed in head; intestine; and tail. Is an ortholog of human RABGGTB (Rab geranylgeranyltransferase subunit beta). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | B0280.1a | |||||
B0280.1b | |||||||
Corresponding_CDS_history | B0280.1b:wp151 | ||||||
Corresponding_transcript | B0280.1a.1 | ||||||
B0280.1b.1 | |||||||
B0280.1b.2 | |||||||
Other_sequence (54) | |||||||
Associated_feature | WBsf645319 | ||||||
WBsf225199 | |||||||
Experimental_info | RNAi_result | WBRNAi00007191 | Inferred_automatically | RNAi_primary | |||
WBRNAi00099562 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00116425 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00099764 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00100902 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005163 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038837 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085800 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038838 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00100341 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022262 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038844 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00091936 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00090857 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00100715 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00100528 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028047 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00099967 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038839 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00061381 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00100154 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005445 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00099360 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00099158 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038845 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1088 | ||||||
Expr90 | |||||||
Expr5033 | |||||||
Expr1021670 | |||||||
Expr1036451 | |||||||
Expr1143036 | |||||||
Expr2012036 | |||||||
Expr2030272 | |||||||
Drives_construct | WBCnstr00002196 | ||||||
WBCnstr00029088 | |||||||
Construct_product | WBCnstr00029088 | ||||||
Microarray_results (32) | |||||||
Expression_cluster (117) | |||||||
Interaction (20) | |||||||
Map_info | Map | III | Position | -0.787736 | Error | 0.0003 | |
Positive | Positive_clone | B0280 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00018228 | ||||||
WBPaper00030935 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00059604 | |||||||
WBPaper00064071 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |