WormBase Tree Display for Gene: WBGene00006465
expand all nodes | collapse all nodes | view schema
| WBGene00006465 | SMap | S_parent | Sequence | F23B12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | fntb-1 | Person_evidence | WBPerson114 | |||||
| Sequence_name | F23B12.6 | ||||||||
| Molecular_name | F23B12.6 | ||||||||
| F23B12.6.1 | |||||||||
| CE09598 | |||||||||
| F23B12.6.2 | |||||||||
| Other_name | tag-114 | Person_evidence | WBPerson201 | ||||||
| nde-4 | Paper_evidence | WBPaper00049708 | |||||||
| CELE_F23B12.6 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | fntb-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 20 Apr 2005 12:04:46 | WBPerson2970 | Event | Acquires_merge | WBGene00009083 | ||||
| 3 | 10 Sep 2008 16:37:04 | WBPerson2970 | Name_change | CGC_name | fntb-1 | ||||
| Other_name | tag-114 | ||||||||
| 4 | 02 Aug 2016 10:51:02 | WBPerson2970 | Name_change | Other_name | nde-4 | ||||
| Acquires_merge | WBGene00009083 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fntb | ||||||||
| Allele (52) | |||||||||
| Strain | WBStrain00031889 | ||||||||
| WBStrain00035740 | |||||||||
| WBStrain00049734 | |||||||||
| WBStrain00049629 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP5420 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00013002 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00015099 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable protein prenyltransferase activity and zinc ion binding activity. Predicted to contribute to protein farnesyltransferase activity. Predicted to be part of protein farnesyltransferase complex. Expressed in body wall musculature; neurons; pharyngeal muscle cell; rectal epithelial cell; and vulval cell. Is an ortholog of human CHURC1-FNTB (CHURC1-FNTB readthrough) and FNTB (farnesyltransferase, CAAX box, beta). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:2030 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3785) | ||||
| Molecular_info | Corresponding_CDS | F23B12.6 | |||||||
| Corresponding_transcript | F23B12.6.1 | ||||||||
| F23B12.6.2 | |||||||||
| Other_sequence (46) | |||||||||
| Associated_feature | WBsf647531 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00082077 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00061510 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061385 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031306 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045382 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013798 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12955 | ||||||||
| Expr12956 | |||||||||
| Expr1014850 | |||||||||
| Expr1032636 | |||||||||
| Expr1149305 | |||||||||
| Expr2011864 | |||||||||
| Expr2030102 | |||||||||
| Drives_construct | WBCnstr00037900 | ||||||||
| WBCnstr00038047 | |||||||||
| WBCnstr00038048 | |||||||||
| Construct_product | WBCnstr00037900 | ||||||||
| WBCnstr00038047 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction (47) | |||||||||
| Map_info | Map | V | Position | 6.34721 | Error | 0.011279 | |||
| Positive | Positive_clone | F23B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5296 | |||||||
| 4170 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035302 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039155 | |||||||||
| WBPaper00043306 | |||||||||
| WBPaper00049708 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064071 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
