WormBase Tree Display for Gene: WBGene00020109

WBGene00020109 SMap: S_parent: Sequence: R151
  Identity: Version: 2
    Name: CGC_name: der-2 Person_evidence: WBPerson2876
      Sequence_name: R151.6
      Molecular_name: R151.6
        R151.6.1
        CE39620
      Other_name: CELE_R151.6 Accession_evidence: NDB BX284603
      Public_name: der-2
    DB_info: Database: AceView gene 3I312
        WormQTL gene WBGene00020109
        WormFlux gene WBGene00020109
        NDB locus_tag CELE_R151.6
        Panther gene CAEEL|WormBase=WBGene00020109|UniProtKB=Q21997
          family PTHR11009
        NCBI gene 176018
        RefSeq protein NM_001392140.1
        SwissProt UniProtAcc Q21997
        TREEFAM TREEFAM_ID TF314715
        UniProt_GCRP UniProtAcc Q21997
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 02 Mar 2020 15:25:00 WBPerson1983 Name_change: CGC_name: der-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: der
    Allele (23)
    Strain: WBStrain00052444
    RNASeq_FPKM (74)
    GO_annotation (19)
    Contained_in_operon: CEOP3424
    Ortholog (40)
    Paralog: WBGene00000843 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable misfolded protein binding activity; signal recognition particle binding activity; and ubiquitin-specific protease binding activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of Hrd1p ubiquitin ligase ERAD-L complex. Is an ortholog of human DERL2 (derlin 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R151.6
    Corresponding_CDS_history: R151.6:wp153
    Corresponding_transcript: R151.6.1
    Other_sequence (31)
    Associated_feature: WBsf226933
      WBsf226934
  Experimental_info: RNAi_result: WBRNAi00080960 Inferred_automatically: RNAi_primary
      WBRNAi00093389 Inferred_automatically: RNAi_primary
      WBRNAi00093391 Inferred_automatically: RNAi_primary
      WBRNAi00108401 Inferred_automatically: RNAi_primary
      WBRNAi00051979 Inferred_automatically: RNAi_primary
      WBRNAi00027891 Inferred_automatically: RNAi_primary
      WBRNAi00080961 Inferred_automatically: RNAi_primary
      WBRNAi00005512 Inferred_automatically: RNAi_primary
      WBRNAi00065525 Inferred_automatically: RNAi_primary
      WBRNAi00076619 Inferred_automatically: RNAi_primary
      WBRNAi00080959 Inferred_automatically: RNAi_primary
      WBRNAi00051978 Inferred_automatically: RNAi_primary
      WBRNAi00108404 Inferred_automatically: RNAi_primary
      WBRNAi00080958 Inferred_automatically: RNAi_primary
      WBRNAi00017872 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016417
      Expr1038745
      Expr1155622
      Expr2005658
      Expr2023874
    Drives_construct: WBCnstr00025369
    Construct_product: WBCnstr00025369
    Microarray_results (20)
    Expression_cluster (65)
    Interaction (18)
  Map_info: Map: III Position: -0.767964
    Positive: Positive_clone: R151 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00003662
    WBPaper00013426
    WBPaper00013520
    WBPaper00033458
    WBPaper00038491
    WBPaper00039837
    WBPaper00041771
    WBPaper00052163
    WBPaper00055090
    WBPaper00059773
    WBPaper00061946
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene