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WormBase Tree Display for Gene: WBGene00228483

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Name Class

WBGene00228483SMapS_parentSequenceBm_v4_ChrX_scaffold_001
IdentityVersion6
NameCGC_nameBma-ncam-1From_analysisInferred_from_orthology
Sequence_nameBm8222
Molecular_nameBm8222a
Bm8222a.1
BM40162
Bm8222b
BM45723
Bm8222b.1
Other_nameBm-ncam-1
TAG8222Curator_confirmedWBPerson4055
Bm1_01470ACurator_confirmedWBPerson4055
Bm1_01470Person_evidenceWBPerson5841
Public_nameBma-ncam-1
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
205 Jul 2013 11:43:21WBPerson4055Name_changeCGC_nameBma-ncam-1
Other_nameBm-ncam-1
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:24WBPerson1983Name_changeCGC_nameBma-ncam-1
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameBma-ncam-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classncam
RNASeq_FPKMWBls:000009728.7006From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
0From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
27.6298From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
3.36588From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
4.79995From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
6.13982From_analysisRNASeq.brugia.WBls:0000097.control_median
7.47969From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
8.67993From_analysisRNASeq.brugia.WBls:0000097.control_mean
8.80427From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
WBls:000007811.1117From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
13.1341From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
13.388From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
13.4454From_analysisRNASeq.brugia.WBls:0000078.control_mean
15.3154From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
15.9127From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
16.0793From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
9.17655From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
WBls:000008040.6037From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
43.6773From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
48.3763From_analysisRNASeq.brugia.WBls:0000080.control_median
49.4411From_analysisRNASeq.brugia.WBls:0000080.control_mean
53.0753From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
60.4081From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (24)
WBls:000008226.4597From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
27.3533From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
29.9424From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
49.1172From_analysisRNASeq.brugia.WBls:0000082.control_mean
78.7872From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
83.0436From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
WBls:0000083 (82)
WBls:000009244.5379From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
46.4832From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
48.4286From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:0000094101.331From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
101.483From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
101.636From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010128.4789From_analysisRNASeq.brugia.total_over_all_stages.control_median
35.7427From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:000066224.7947From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
26.6368From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
28.4789From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066328.9934From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
GO_annotation00247137
00247138
Ortholog (28)
ParalogWBGene00222569Brugia malayiFrom_analysisWormBase-Compara
WBGene00222637Brugia malayiFrom_analysisWormBase-Compara
WBGene00223169Brugia malayiFrom_analysisWormBase-Compara
WBGene00225216Brugia malayiFrom_analysisWormBase-Compara
WBGene00226094Brugia malayiFrom_analysisWormBase-Compara
WBGene00227085Brugia malayiFrom_analysisWormBase-Compara
WBGene00227726Brugia malayiFrom_analysisWormBase-Compara
WBGene00228273Brugia malayiFrom_analysisWormBase-Compara
WBGene00231083Brugia malayiFrom_analysisWormBase-Compara
WBGene00269356Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in axon guidance and cell adhesion. Predicted to be located in plasma membrane. Is an ortholog of C. elegans ncam-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm8222a
Bm8222b
Corresponding_transcriptBm8222a.1
Bm8222b.1
Other_sequence (14)
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P5
WBPaper00049261:20-hydroxyecdysone_upregulated_protein
WBPaper00051007:downregulated_M42_vs_M30
WBPaper00051007:upregulated_F120_vs_F30
WBPaper00051007:upregulated_M30_vs_L4
WBPaper00051007:upregulated_M120_vs_M30
WBPaper00061765:L3_vs_Adult_Upregulated
ReferenceWBPaper00045439
WBPaper00048750
Remark (2)
MethodGene