Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00226094

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00226094SMapS_parentSequenceBm_v4_Chr3_scaffold_001
IdentityVersion7
NameCGC_nameBma-unc-40From_analysisInferred_from_orthology
Sequence_nameBm5833
Molecular_nameBm5833
Bm5833.1
BM45234
Other_nameTAG5833Curator_confirmedWBPerson4055
Bm1_41685ACurator_confirmedWBPerson4055
Bm1_41690ACurator_confirmedWBPerson4055
TAG14354
Bm1_41685Person_evidenceWBPerson5841
Bm1_41690Person_evidenceWBPerson5841
Public_nameBma-unc-40
SpeciesBrugia malayi
HistoryVersion_change110 Dec 2012 14:43:25WBPerson4055EventCreated
224 Mar 2014 11:31:07WBPerson4055Name_changeCGC_nameBma-unc-40
302 Dec 2015 10:31:22WBPerson4055EventAcquires_mergeWBGene00234615
408 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
508 May 2019 10:09:25WBPerson1983Name_changeCGC_nameBma-unc-40
604 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameRemoved
728 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameBma-unc-40
Acquires_mergeWBGene00234615
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000009713.9228From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
11.9232From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
16.7914From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
22.6095From_analysisRNASeq.brugia.WBls:0000097.control_median
26.2638From_analysisRNASeq.brugia.WBls:0000097.control_mean
28.4276From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
36.05From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
55.6118From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
8.77885From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
WBls:000007822.4835From_analysisRNASeq.brugia.WBls:0000078.control_mean
26.1338From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
26.6502From_analysisRNASeq.brugia.WBls:0000078.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
29.3235From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
30.8276From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
32.8177From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
5.79044From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
5.84118From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
WBls:000008025.5193From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
30.8371From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
31.587From_analysisRNASeq.brugia.WBls:0000080.control_mean
32.4021From_analysisRNASeq.brugia.WBls:0000080.control_median
33.9672From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
36.0244From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (24)
WBls:000008223.1671From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
23.5408From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
24.9155From_analysisRNASeq.brugia.WBls:0000082.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
25.0203From_analysisRNASeq.brugia.WBls:0000082.control_mean
26.4716From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
27.0065From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
WBls:0000083 (82)
WBls:000009255.1026From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
55.9353From_analysisRNASeq.brugia.WBls:0000092.control_mean
RNASeq.brugia.WBls:0000092.control_median
56.7681From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009484.2965From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
88.6917From_analysisRNASeq.brugia.WBls:0000094.control_mean
RNASeq.brugia.WBls:0000094.control_median
93.0868From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:000010128.0298From_analysisRNASeq.brugia.total_over_all_stages.control_median
34.2437From_analysisRNASeq.brugia.total_over_all_stages.control_mean
WBls:000066245.2923From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
45.9129From_analysisRNASeq.brugia.WBls:0000662.control_mean
RNASeq.brugia.WBls:0000662.control_median
46.5335From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
WBls:000066359.8297From_analysisRNASeq.brugia.WBls:0000663.control_mean
RNASeq.brugia.WBls:0000663.control_median
RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Ortholog (36)
ParalogWBGene00222569Brugia malayiFrom_analysisWormBase-Compara
WBGene00222637Brugia malayiFrom_analysisWormBase-Compara
WBGene00223169Brugia malayiFrom_analysisWormBase-Compara
WBGene00225216Brugia malayiFrom_analysisWormBase-Compara
WBGene00227085Brugia malayiFrom_analysisWormBase-Compara
WBGene00227726Brugia malayiFrom_analysisWormBase-Compara
WBGene00228273Brugia malayiFrom_analysisWormBase-Compara
WBGene00228483Brugia malayiFrom_analysisWormBase-Compara
WBGene00231083Brugia malayiFrom_analysisWormBase-Compara
WBGene00269356Brugia malayiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans unc-40. In C. elegans, unc-40 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSBm5833
Corresponding_transcriptBm5833.1
Other_sequence (35)
Experimental_infoExpression_clusterWBPaper00045439:BM_Cluster_P5
WBPaper00049974:ivermectin_100nM_48h_upregulated
WBPaper00051007:downregulated_F120_vs_F30
WBPaper00051007:downregulated_M120_vs_F120
WBPaper00061765:L3_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Adult_Upregulated
WBPaper00061765:L4_vs_Micro_Upregulated
ReferenceWBPaper00045439
WBPaper00048750
Remark[190208 pad] The CGC name Bma-unc-40 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[200603 pad] The CGC name Bma-unc-40 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene