WormBase Tree Display for Gene: WBGene00224134

WBGene00224134 SMap: S_parent: Sequence: Bm_v4_Chr3_scaffold_001
  Identity: Version: 7
    Name (5)
    Species: Brugia malayi
    History: Version_change: 1 10 Dec 2012 14:43:24 WBPerson4055 Event: Created
        2 19 Apr 2016 17:09:35 WBPerson4055 Event: Acquires_merge: WBGene00228652
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Bma-tax-2
        4 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:25 WBPerson1983 Name_change: CGC_name: Bma-tax-2
        6 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        7 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Bma-tax-2
      Acquires_merge: WBGene00228652
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tax
    RNASeq_FPKM: WBls:0000097 0.727754 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.L3/L4.WBbt:0007833.SRP068692.SRX1539819
        0.401262 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
        0.456846 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
        0.736138 From_analysis: RNASeq.brugia.WBls:0000097.control_median
        1.01543 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
        1.33341 From_analysis: RNASeq.brugia.WBls:0000097.control_mean
        1.61552 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
        0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
        4.51139 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
      WBls:0000078 0.213523 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
        0.410152 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
        0.755167 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
        0.758428 From_analysis: RNASeq.brugia.WBls:0000078.control_median
            RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
        1.74345 From_analysis: RNASeq.brugia.WBls:0000078.control_mean
        2.921 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
        3.34496 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
        3.80091 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
      WBls:0000080 0.990359 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
        1.40393 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
        1.76314 From_analysis: RNASeq.brugia.WBls:0000080.control_median
        1.80166 From_analysis: RNASeq.brugia.WBls:0000080.control_mean
        2.12236 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
        2.68997 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
      WBls:0000081 (23)
      WBls:0000082 0.027956 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
        0.035398 From_analysis: RNASeq.brugia.WBls:0000082.control_mean
        0.149035 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
        0 From_analysis: RNASeq.brugia.WBls:0000082.control_median
            RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
            RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
            RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
      WBls:0000083 (77)
      WBls:0000092 9.43969 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
        9.5303 From_analysis: RNASeq.brugia.WBls:0000092.control_mean
            RNASeq.brugia.WBls:0000092.control_median
        9.62091 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
      WBls:0000094 0.743682 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
        0.994501 From_analysis: RNASeq.brugia.WBls:0000094.control_mean
            RNASeq.brugia.WBls:0000094.control_median
        1.24532 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
      WBls:0000101 0.813355 From_analysis: RNASeq.brugia.total_over_all_stages.control_median
        2.09159 From_analysis: RNASeq.brugia.total_over_all_stages.control_mean
      WBls:0000662 0.825957 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
        1.07327 From_analysis: RNASeq.brugia.WBls:0000662.control_mean
            RNASeq.brugia.WBls:0000662.control_median
        1.32059 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
      WBls:0000663 0.368839 From_analysis: RNASeq.brugia.WBls:0000663.control_mean
            RNASeq.brugia.WBls:0000663.control_median
            RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
    Ortholog (31)
    Paralog: WBGene00222745 Brugia malayi From_analysis: WormBase-Compara
      WBGene00223665 Brugia malayi From_analysis: WormBase-Compara
      WBGene00227409 Brugia malayi From_analysis: WormBase-Compara
      WBGene00227604 Brugia malayi From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Cyclic nucleotide-binding domain; Cyclic nucleotide-binding-like; and RmlC-like jelly roll fold. Is an ortholog of C. elegans tax-2. In C. elegans, tax-2 is involved in several processes, including G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger; negative regulation of cGMP-mediated signaling; and positive regulation of macromolecule biosynthetic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Bm3873
    Corresponding_CDS_history: Bm3873:bm252
    Corresponding_transcript: Bm3873.1
    Other_sequence (50)
  Experimental_info: Expression_cluster: WBPaper00051007:downregulated_F120_vs_F30
      WBPaper00051007:downregulated_F120_vs_F42
      WBPaper00051007:downregulated_M120_vs_F120
      WBPaper00051007:upregulated_M42_vs_F42
      WBPaper00051007:upregulated_M42_vs_M30
      WBPaper00051007:upregulated_M120_vs_M42
  Reference: WBPaper00045439
  Remark: [190208 pad] The CGC name Bma-tax-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Bma-tax-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene