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WormBase Tree Display for Gene: WBGene00015971

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Name Class

WBGene00015971SMapS_parentSequenceC18E3
IdentityVersion2
NameCGC_nameswsn-2.2Person_evidenceWBPerson407
WBPerson552
Sequence_nameC18E3.2
Molecular_nameC18E3.2
C18E3.2.1
CE30249
Other_nameCELE_C18E3.2Accession_evidenceNDBBX284601
Public_nameswsn-2.2
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
211 Feb 2011 15:09:46WBPerson2970Name_changeCGC_nameswsn-2.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classswsn
Allele (31)
StrainWBStrain00029672
WBStrain00031318
WBStrain00037543
RNASeq_FPKMWBls:0000002 (84)
WBls:0000003 (11)
WBls:0000004 (47)
WBls:0000006166.967From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000006.Hermaphrodite.WBbt:0007833.SRP042619.SRX559705
RNASeq.elegans.WBStrain00000001.WBls:0000006.Hermaphrodite.WBbt:0007833.SRP042619.SRX559706
WBls:0000007 (11)
WBls:000000816.0373From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000008.Hermaphrodite.WBbt:0007833.SRP000401.SRX085219
59.4147From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000008.Hermaphrodite.WBbt:0007833.SRP000401.SRX085220
93.0108From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000008.Hermaphrodite.WBbt:0007833.SRP000401.SRX145480
WBls:0000010 (15)
WBls:0000013 (11)
WBls:0000014 (19)
WBls:0000015 (24)
WBls:000001712.3192From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004804.SRP029448.SRX343252
14.1072From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004804.SRP029448.SRX343254
15.5292From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004804.SRP029448.SRX343253
1.72084From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0003810.SRP029448.SRX343324
1e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004015.SRP029448.SRX343304
RNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004458.SRP029448.SRX343278
RNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0008115.SRP029448.SRX343342
44.2947From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004015.SRP029448.SRX343305
6.74879From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004458.SRP029448.SRX343277
8.75898From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0003810.SRP029448.SRX343325
WBls:0000020 (16)
WBls:0000021 (20)
WBls:00000239.92617From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000023.Hermaphrodite.WBbt:0007833.SRP015688.SRX185639
WBls:0000024 (70)
WBls:0000027 (15)
WBls:000003112.1158From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103276
12.3634From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103277
12.9367From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103273
14.9042From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103274
15.7325From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103275
16.4544From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX047470
7.01991From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX008139
WBls:000003210.6493From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX008138
15.6028From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX103985
15.8177From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP058023.SRX1019178
18.0984From_analysisRNASeq.elegans.WBls:0000032.control_mean
RNASeq.elegans.WBls:0000032.control_median
19.6856From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX103983
20.3792From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP058023.SRX1019179
8.15894From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX103984
WBls:0000035 (31)
WBls:0000038 (88)
WBls:0000041 (30)
WBls:000005217.4682From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103281
18.6393From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103278
19.9001From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103279
20.264From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103280
21.368From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103272
22.095From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103269
22.8821From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103271
23.8462From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103270
6.50962From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX008140
8.19455From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX037199
WBls:000006310.0218From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426020
10.1257From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Male.WBbt:0007833.SRP034667.SRX397087
102.102From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643426
102.916From_analysisRNASeq.elegans.WBStrain00034434.WBls:0000063.Hermaphrodite.WBbt:0005175.SRP049412.SRX747678
10.3362From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426025
10.7994From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426023
108.372From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643425
11.1206From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426026
113.045From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426018
11.3171From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Male.WBbt:0007833.SRP034667.SRX397084
11.3234From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426030
11.3261From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426032
113.804From_analysisRNASeq.elegans.WBStrain00034434.WBls:0000063.Hermaphrodite.WBbt:0005175.SRP049412.SRX747677
115.294From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426019
11.7102From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426022
12.4638From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426024
12.4701From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426035
12.5356From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426033
12.8692From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426031
13.143From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426034
14.4362From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426036
15.2651From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426037
21.0089From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426039
22.985From_analysisRNASeq.elegans.WBStrain00034434.WBls:0000063.Hermaphrodite.WBbt:0005784.SRP049412.SRX747679
22.9929From_analysisRNASeq.elegans.WBStrain00034434.WBls:0000063.Hermaphrodite.WBbt:0005784.SRP049412.SRX747680
23.6383From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Female.WBbt:0007833.SRP034667.SRX397089
24.4333From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103991
24.888From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX014009
25.5396From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426038
27.3874From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Female.WBbt:0007833.SRP034667.SRX397091
27.6649From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103990
30.479From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Female.WBbt:0007833.SRP034667.SRX397088
30.6936From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643421
31.0043From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Female.WBbt:0007833.SRP034667.SRX397090
31.9296From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX014008
36.0747From_analysisRNASeq.elegans.WBStrain00000364.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP003783.SRX028193
36.891From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX047787
40.8008From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX001873
41.2508From_analysisRNASeq.elegans.WBStrain00024040.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP015918.SRX189886
42.2067From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643423
43.983From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643422
48.8926From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426041
50.6976From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103989
51.6768From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426040
51.9939From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX014006
52.6127From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392703
5.37425From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426045
54.1839From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103988
56.2346From_analysisRNASeq.elegans.WBStrain00000031.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494554
56.6971From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494547
57.5059From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103986
57.5569From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103987
58.7009From_analysisRNASeq.elegans.WBStrain00000029.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494550
58.8532From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426002
60.1734From_analysisRNASeq.elegans.WBStrain00000029.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494551
6.07633From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426046
61.3593From_analysisRNASeq.elegans.WBStrain00000029.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494552
61.6914From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494548
62.1238From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494549
62.2341From_analysisRNASeq.elegans.WBStrain00000031.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494553
6.33696From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426047
64.44From_analysisRNASeq.elegans.WBStrain00000030.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494557
65.0401From_analysisRNASeq.elegans.WBStrain00000031.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494555
6.53557From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426044
66.1536From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426016
66.6071From_analysisRNASeq.elegans.WBStrain00000030.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494556
6.66781From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426050
6.77698From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426048
67.9308From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX014007
67.9793From_analysisRNASeq.elegans.WBStrain00000030.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494558
68.4414From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426003
69.5289From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426017
6.97748From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426049
7.01348From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426052
73.063From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426013
73.2988From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426007
73.9098From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0005784.SRP057263.SRX997495
74.8696From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426008
75.2754From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426009
75.6455From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP015918.SRX189885
75.7978From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426011
75.8947From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426005
77.1026From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426012
78.3263From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426006
7.87393From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426042
79.399From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426010
80.1692From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426004
8.05055From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426053
8.07312From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426051
8.42301From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Male.WBbt:0007833.SRP034667.SRX397086
85.2659From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643418
8.53655From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426029
88.0598From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643424
88.1722From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426014
90.8664From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426015
9.21996From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426043
93.649From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643420
9.41801From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426027
94.3137From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643419
94.9298From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0005784.SRP057263.SRX997493
9.88015From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426028
9.89028From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426021
9.92748From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Male.WBbt:0007833.SRP034667.SRX397085
WBls:0000064 (14)
WBls:0000065 (16)
WBls:0000068102.572From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265360
105.444From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265361
105.524From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265362
106.204From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265364
108.14From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265365
99.7825From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265363
WBls:000013128.5695From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343227
40.1301From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006876.SRP029448.SRX343221
49.9387From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006876.SRP029448.SRX343223
52.2701From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006771.SRP029448.SRX343226
54.1335From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006771.SRP029448.SRX343225
58.5537From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343229
61.6614From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006876.SRP029448.SRX343222
63.2543From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343228
66.4246From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343220
WBls:000014191.2765From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000141.Hermaphrodite.WBbt:0007833.SRP029448.SRX343161
WBls:0000151 (14)
WBls:0000171 (15)
WBls:000018199.829From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000181.Hermaphrodite.WBbt:0007833.SRP029448.SRX343164
WBls:0000191116.153From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000191.Hermaphrodite.WBbt:0007833.SRP029448.SRX343165
WBls:0000201 (12)
WBls:0000221102.452From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004015.SRP029448.SRX343291
120.786From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004458.SRP029448.SRX343266
135.987From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004015.SRP029448.SRX343290
38.3946From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004458.SRP029448.SRX343264
45.3818From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0003810.SRP029448.SRX343314
50.3278From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0003810.SRP029448.SRX343315
52.7153From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0008115.SRP029448.SRX343334
66.7948From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004804.SRP029448.SRX343241
72.9899From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0008115.SRP029448.SRX343333
79.4536From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004458.SRP029448.SRX343265
WBls:000023180.2971From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000231.Hermaphrodite.WBbt:0007833.SRP029448.SRX343167
WBls:0000251170.762From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004015.SRP029448.SRX343292
22.5165From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004804.SRP029448.SRX343243
23.5278From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004804.SRP029448.SRX343244
29.7002From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004458.SRP029448.SRX343268
37.6746From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0008115.SRP029448.SRX343336
41.6859From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0003810.SRP029448.SRX343317
43.4404From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004804.SRP029448.SRX343242
45.7913From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0008115.SRP029448.SRX343337
77.848From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0008115.SRP029448.SRX343335
96.3924From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0007833.SRP029448.SRX343168
WBls:0000261100.858From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000261.Hermaphrodite.WBbt:0007833.SRP029448.SRX343169
WBls:0000281101.937From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000281.Hermaphrodite.WBbt:0007833.SRP029448.SRX343170
WBls:0000291 (13)
WBls:0000301100.828From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000301.Hermaphrodite.WBbt:0007833.SRP029448.SRX343172
WBls:0000311114.656From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000311.Hermaphrodite.WBbt:0007833.SRP029448.SRX343173
WBls:0000321144.524From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000321.Hermaphrodite.WBbt:0007833.SRP029448.SRX343174
WBls:0000331121.541From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000331.Hermaphrodite.WBbt:0007833.SRP029448.SRX343175
203.137From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000331.Hermaphrodite.WBbt:0007833.SRP029448.SRX343176
WBls:0000351108.556From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000351.Hermaphrodite.WBbt:0007833.SRP029448.SRX343179
162.864From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000351.Hermaphrodite.WBbt:0007833.SRP029448.SRX343178
WBls:0000361128.966From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000361.Hermaphrodite.WBbt:0007833.SRP029448.SRX343180
WBls:0000381150.53From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004458.SRP029448.SRX343275
153.058From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0008115.SRP029448.SRX343340
154.707From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004015.SRP029448.SRX343299
181.672From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004458.SRP029448.SRX343274
261.222From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0003810.SRP029448.SRX343320
316.476From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004015.SRP029448.SRX343297
34.7212From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004804.SRP029448.SRX343248
52.5638From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004804.SRP029448.SRX343249
56.7492From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004804.SRP029448.SRX343250
WBls:000039172.237From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000391.Hermaphrodite.WBbt:0007833.SRP029448.SRX343181
WBls:000040172.5884From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000401.Hermaphrodite.WBbt:0007833.SRP029448.SRX343182
WBls:000042196.5958From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000421.Hermaphrodite.WBbt:0007833.SRP029448.SRX343184
WBls:000043171.8455From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000431.Hermaphrodite.WBbt:0007833.SRP029448.SRX343185
WBls:000045144.5744From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000451.Hermaphrodite.WBbt:0007833.SRP029448.SRX343186
WBls:000046140.9357From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000461.Hermaphrodite.WBbt:0007833.SRP029448.SRX343187
WBls:00004711e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0008115.SRP029448.SRX343341
33.2486From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004458.SRP029448.SRX343276
42.6001From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0007833.SRP029448.SRX343189
68.3582From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004015.SRP029448.SRX343302
82.7771From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004015.SRP029448.SRX343300
85.3581From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004015.SRP029448.SRX343301
98.3678From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004804.SRP029448.SRX343251
WBls:000049130.29From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000491.Hermaphrodite.WBbt:0007833.SRP029448.SRX343191
WBls:000050126.805From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000501.Hermaphrodite.WBbt:0007833.SRP029448.SRX343192
WBls:000051129.1121From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000511.Hermaphrodite.WBbt:0007833.SRP029448.SRX343194
WBls:000052118.6643From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000521.Hermaphrodite.WBbt:0007833.SRP029448.SRX343195
WBls:000053124.1942From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000531.Hermaphrodite.WBbt:0007833.SRP029448.SRX343196
25.1109From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000531.Hermaphrodite.WBbt:0007833.SRP029448.SRX343197
WBls:000054115.3625From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000541.Hermaphrodite.WBbt:0007833.SRP029448.SRX343199
19.102From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000541.Hermaphrodite.WBbt:0007833.SRP029448.SRX343198
WBls:00005519.78013From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000551.Hermaphrodite.WBbt:0007833.SRP029448.SRX343200
WBls:000056131.1142From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000561.Hermaphrodite.WBbt:0007833.SRP029448.SRX343201
WBls:000058126.528From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000581.Hermaphrodite.WBbt:0007833.SRP029448.SRX343202
WBls:000062116.1352From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000621.Hermaphrodite.WBbt:0007833.SRP029448.SRX343203
WBls:0000674101.305From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265369
101.624From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265370
101.821From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265367
104.469From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265368
106.782From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265371
121.932From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265366
WBls:0000676100.419From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265374
106.214From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265373
108.437From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265375
110.954From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265372
WBls:00006945.60493From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000694.Hermaphrodite.WBbt:0007833.SRP029448.SRX343205
WBls:00006958.22168From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000695.Hermaphrodite.WBbt:0007833.SRP029448.SRX343206
WBls:00006968.09085From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000696.Hermaphrodite.WBbt:0007833.SRP029448.SRX343207
WBls:00006972.3157From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000697.Hermaphrodite.WBbt:0007833.SRP029448.SRX343208
WBls:000069917.8724From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000699.Hermaphrodite.WBbt:0007833.SRP029448.SRX343210
WBls:00007004.41258From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000700.Hermaphrodite.WBbt:0007833.SRP029448.SRX343211
WBls:000070122.2138From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000701.Hermaphrodite.WBbt:0007833.SRP029448.SRX343212
WBls:000070220.6007From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000702.Hermaphrodite.WBbt:0007833.SRP029448.SRX343213
WBls:00007030.437948From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000703.Hermaphrodite.WBbt:0007833.SRP029448.SRX343214
GO_annotation (16)
Contained_in_operonCEOP1946
Ortholog (44)
ParalogWBGene00044072Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00044585Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
WBGene00020779Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010523Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionswsn-2.2 encodes a homolog of Swp73/BAF60, a component of the SWI/SNF complex that is conserved from yeast to mammals and that is involved in chromatin remodeling; swsn-2.2 is probably required during mitosis of the T cells for asymmetric cell division.Paper_evidenceWBPaper00004350
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated01 Aug 2011 00:00:00
Automated_descriptionPredicted to enable RNA polymerase II-specific DNA-binding transcription factor binding activity and transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Located in condensed chromosome; nuclear envelope; and nucleoplasm. Expressed in several structures, including HSNL and HSNR. Used to study alcohol use disorder. Human ortholog(s) of this gene implicated in Coffin-Siris syndrome 11. Is an ortholog of human SMARCD1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1); SMARCD2 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2); and SMARCD3 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:1574Homo sapiensPaper_evidenceWBPaper00046494
Curator_confirmedWBPerson324
Date_last_updated20 May 2019 00:00:00
Potential_modelEFO:MONDO:0009506Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11107)
DOID:0112372Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11106)
Models_disease_assertedWBDOannot00000665
Molecular_infoCorresponding_CDSC18E3.2
Corresponding_transcriptC18E3.2.1
Other_sequence (12)
Associated_featureWBsf643191
WBsf643192
WBsf656176
WBsf983356
WBsf217501
Experimental_infoRNAi_resultWBRNAi00007940Inferred_automaticallyRNAi_primary
WBRNAi00040936Inferred_automaticallyRNAi_primary
WBRNAi00061241Inferred_automaticallyRNAi_primary
WBRNAi00093893Inferred_automaticallyRNAi_primary
WBRNAi00069103Inferred_automaticallyRNAi_primary
WBRNAi00016521Inferred_automaticallyRNAi_primary
WBRNAi00061240Inferred_automaticallyRNAi_primary
WBRNAi00093974Inferred_automaticallyRNAi_primary
WBRNAi00093943Inferred_automaticallyRNAi_primary
Expr_patternExpr16204
Expr16205
Expr1016633
Expr1036825
Expr1144983
Expr2017157
Expr2035293
Drives_constructWBCnstr00017369
WBCnstr00028413
WBCnstr00042800
Construct_productWBCnstr00028413
WBCnstr00042800
Regulate_expr_clusterWBPaper00049018:swsn-2.2(RNAi)_downregulated
WBPaper00049018:swsn-2.2(RNAi)_upregulated
WBPaper00049018:SWSN-2.2_interacting
AntibodyWBAntibody00002683
Microarray_results (24)
Expression_cluster (135)
Interaction (345)
Map_infoMapIPosition-1.58056Error0.006827
PositivePositive_cloneC18E3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031554
WBPaper00038491
WBPaper00043854
WBPaper00046494
WBPaper00049018
WBPaper00055090
WBPaper00060275
WBPaper00065308
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene