WormBase Tree Display for Gene: WBGene00009394
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WBGene00009394 | SMap | S_parent | Sequence | F35C5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-63 | Person_evidence | WBPerson261 | |||
WBPerson655 | |||||||
Sequence_name | F35C5.6 | ||||||
Molecular_name | F35C5.6 | ||||||
F35C5.6.1 | |||||||
CE15947 | |||||||
Other_name | CELE_F35C5.6 | Accession_evidence | NDB | BX284602 | |||
Public_name | clec-63 | ||||||
DB_info | Database | AceView | gene | 2N187 | |||
WormQTL | gene | WBGene00009394 | |||||
WormFlux | gene | WBGene00009394 | |||||
NDB | locus_tag | CELE_F35C5.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00009394|UniProtKB=O45444 | |||||
family | PTHR31024 | ||||||
NCBI | gene | 174927 | |||||
RefSeq | protein | NM_064342.7 | |||||
TREEFAM | TREEFAM_ID | TF317104 | |||||
TrEMBL | UniProtAcc | O45444 | |||||
UniProt_GCRP | UniProtAcc | O45444 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (69) | |||||||
Strain | WBStrain00032688 | ||||||
RNASeq_FPKM (74) | |||||||
Ortholog (53) | |||||||
Paralog | WBGene00008853 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00009393 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00014046 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00012661 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00014047 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00020938 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00014045 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00017322 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
WBGene00009395 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00014043 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00009397 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00014063 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00009396 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Expressed in germ line and intestine. Is predicted to encode a protein with the following domains: von Willebrand factor, type A; C-type lectin fold; von Willebrand factor type A domain; von Willebrand factor A-like domain superfamily; C-type lectin-like/link domain superfamily; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F35C5.6 | |||||
Corresponding_transcript | F35C5.6.1 | ||||||
Other_sequence (22) | |||||||
Associated_feature | WBsf644774 | ||||||
WBsf222303 | |||||||
WBsf222304 | |||||||
Experimental_info | RNAi_result | WBRNAi00014305 | Inferred_automatically | RNAi_primary | |||
WBRNAi00090590 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00092252 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089359 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031761 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046304 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00075938 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089351 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1003 | ||||||
Expr1005 | |||||||
Expr1024330 | |||||||
Expr1034113 | |||||||
Expr1150192 | |||||||
Expr2010196 | |||||||
Expr2028438 | |||||||
Drives_construct | WBCnstr00032223 | ||||||
Construct_product | WBCnstr00032223 | ||||||
Microarray_results (27) | |||||||
Expression_cluster (280) | |||||||
Interaction (139) | |||||||
WBProcess | WBbiopr:00000039 | ||||||
Map_info | Map | II | Position | 12.3104 | Error | 0.031034 | |
Positive | Positive_clone | F35C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00030985 | ||||||
WBPaper00031686 | |||||||
WBPaper00037541 | |||||||
WBPaper00041339 | |||||||
WBPaper00058665 | |||||||
WBPaper00059481 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |