WormBase Tree Display for Gene: WBGene00009396
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| WBGene00009396 | SMap | S_parent | Sequence | F35C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-65 | Person_evidence | WBPerson261 | |||||
| WBPerson655 | |||||||||
| Sequence_name | F35C5.8 | ||||||||
| Molecular_name | F35C5.8 | ||||||||
| F35C5.8.1 | |||||||||
| CE15949 | |||||||||
| Other_name | CELE_F35C5.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | clec-65 | ||||||||
| DB_info | Database | AceView | gene | 2N193 | |||||
| WormQTL | gene | WBGene00009396 | |||||||
| WormFlux | gene | WBGene00009396 | |||||||
| NDB | locus_tag | CELE_F35C5.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009396|UniProtKB=O45443 | |||||||
| family | PTHR31024 | ||||||||
| NCBI | gene | 174928 | |||||||
| RefSeq | protein | NM_064344.7 | |||||||
| TREEFAM | TREEFAM_ID | TF317104 | |||||||
| TrEMBL | UniProtAcc | O45443 | |||||||
| UniProt_GCRP | UniProtAcc | O45443 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 Sep 2005 17:40:12 | WBPerson2970 | Name_change | CGC_name | clec-65 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (89) | |||||||||
| Strain | WBStrain00032494 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (52) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Expressed in intestine. Is predicted to encode a protein with the following domains: von Willebrand factor, type A; C-type lectin fold; von Willebrand factor type A domain; von Willebrand factor A-like domain superfamily; Lectin C-type domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F35C5.8 | |||||||
| Corresponding_transcript | F35C5.8.1 | ||||||||
| Associated_feature | WBsf644775 | ||||||||
| WBsf222305 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00089346 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00089365 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089344 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00090591 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014306 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046306 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075827 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1007 | ||||||||
| Expr1015259 | |||||||||
| Expr1150194 | |||||||||
| Expr2010198 | |||||||||
| Expr2028439 | |||||||||
| Drives_construct | WBCnstr00032221 | ||||||||
| Construct_product | WBCnstr00032221 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (274) | |||||||||
| Interaction (174) | |||||||||
| Map_info | Map | II | Position | 12.4149 | Error | 0.018746 | |||
| Positive | Positive_clone | F35C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005382 | ||||||||
| WBPaper00031686 | |||||||||
| WBPaper00031865 | |||||||||
| WBPaper00037541 | |||||||||
| WBPaper00058665 | |||||||||
| WBPaper00061178 | |||||||||
| WBPaper00065625 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
