WormBase Tree Display for Gene: WBGene00257583

WBGene00257583 SMap: S_parent: Sequence: SRAE_chr1
  Identity: Version: 1
    Name: Sequence_name: SRAE_1000098300
      Molecular_name: SRAE_1000098300
        SRAE_1000098300.1
        SRP04441
      Public_name: SRAE_1000098300
    Species: Strongyloides ratti
    History: Version_change: 1 01 May 2015 10:45:53 WBPerson4055 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000677 59.6914 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
        61.14 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
        64.0627 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
        64.2049 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
        68.1441 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
        90.5964 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
      WBls:0000678 11.7826 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
        12.27 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
        13.2076 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
        22.1977 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
        25.1995 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
        42.2553 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
        52.626 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
        8.17031 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
      WBls:0000680 331.281 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
      WBls:0000682 129.99 From_analysis: RNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
    GO_annotation: 00265507
      00265508
      00265509
      00265510
    Ortholog (294)
    Paralog: WBGene00257118 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00257754 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00260310 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00261392 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00261603 Strongyloides ratti From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Is an ortholog of C. elegans his-58; his-11; and his-48. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: SRAE_1000098300
    Corresponding_transcript: SRAE_1000098300.1
    Other_sequence: HG07343
      TV01235
      TVC01023_1
      PSC00976_1
      XIC02342_1
      Oden_isotig23625
      Oden_isotig19106
      PPC01312_1
      SC01333
      TMC01681_1
      GW409976.1
      DAC02238_1
      DA04109
      DAC00069_1
      Acan_isotig01574
      CB013406.1
      Acan_isotig01575
      SR04594
      XI00177
      CRC09122_1
      XI04352
      Acan_isotig15693
      XI00998
      CB038169.1
      EY464782.1
      CB013395.1
      Acan_isotig01573
      RSC01664_1
      MIC04190_1
      HGC07521_1
      XI00144
      BM174704.1
      GRC02729_1
      Tcir_isotig08718
      XIC00638_1
      AYC03308_1
      DAC01434_1
      XIC01061_1
      HGC03667_1
      GR13527
      MC05047
      GR978889.1
      GR20103
      DA00047
      AI055797.1
      Acan_isotig01576
      XIC04822_1
      HG04937
      DA03405
      CK854853.1
      DA05374
      GR18820
      XI02009
      TMC00928_1
      HG08948
      CRC06508_1
      RS10407
  Experimental_info: Expression_cluster: WBPaper00050919:down_parasitic_vs_free-living_mRNA
      WBPaper00050919:up_infective-L3_vs_free-living_mRNA
      WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
  Method: Gene