WormBase Tree Display for Gene: WBGene00137640

WBGene00137640 SMap: S_parent: Sequence: Cjap.Contig18143
  Identity: Version: 3
    Name: CGC_name: Cjp-col-140.1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA18436
      Molecular_name: CJA18436
        CJA18436.1
        JA59389
      Public_name: Cjp-col-140.1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cjp-col-140.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    RNASeq_FPKM: WBls:0000004 5.07221 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 1.79064 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 3.04827 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        3.2971 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        3.54593 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 2810.02 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        2883.86 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        2919.18 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        3531.16 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        4057.41 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        4065.83 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        4600.51 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        5197.79 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        5243.24 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        5273.53 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 2497.9 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        2883.86 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00201275
    Ortholog (31)
    Paralog (181)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-140. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA18436
    Corresponding_transcript: CJA18436.1
    Other_sequence: FF679335.1
      EV852084.1
      FG973946.1
      EX012174.1
      ES740985.1
      EX014789.1
      BMC06301_1
      ES410430.1
      ES741007.1
      Dviv_isotig09340
      DN191125.1
      EX913195.1
      ES413721.1
      ES740209.1
      ES743774.1
      Hbac_isotig00238
      EX911741.1
      BG467563.1
      FG975930.1
      ES412156.1
      ES741557.1
      EX010202.1
      EX911650.1
      BF114585.1
      Dviv_isotig09341
      ES411136.1
      CSC00617_1
      ES740616.1
      EX910042.1
      AS08247
      ASC26240_1
      ES412104.1
      EX911819.1
      JG463633.1
      TDC03429_1
      EX008184.1
      ES412433.1
      HBC00980_1
      DQ384535.1
      ES744095.1
      EX916313.1
      CV826711.1
      Tcir_isotig26295
      EX914118.1
      AAC00016_1
      ES413887.1
      HC02367
      ES410212.1
      EX011058.1
      ES412616.1
      ES743877.1
      ES412672.1
      BG467999.1
      FG973614.1
      EX007175.1
      Hbac_isotig02877
      EX006965.1
      DN190630.1
      ES742502.1
      AE04529
      Hbac_isotig00237
      CR02718
      ES411964.1
      ES413765.1
      EX913397.1
      FD517591.1
      AW313004.1
      FF679985.1
      DN190806.1
      EX014196.1
      CR03862
      CV826691.1
      Oden_isotig23969
      EX007548.1
      DVC00896_1
      ES410080.1
      EX913734.1
      ES411492.1
      EX913258.1
      ES410580.1
      ES742862.1
      ES744471.1
      FD517217.1
      Hbac_isotig00673
      CBC00362_1
      FG972030.1
      JO467669.1
      EX009000.1
      EX913237.1
      ES741716.1
      EX012233.1
      EX008297.1
      DVC01132_1
      JI175665.1
      ES412846.1
      JG463649.1
      EX912207.1
      EX914294.1
      ES739365.1
      CRC11974_1
      ES410376.1
      ES740385.1
      HBC00650_1
      ES411106.1
      ES410210.1
      EX911887.1
      DN190307.1
      ACC21709_1
      EX007335.1
      HC03118
      ES408659.1
      CJC16779_1
      AJ275491.1
      FF680262.1
      EX008199.1
      EX541311.1
      ES743748.1
      EX010195.1
      EX913784.1
      EX014277.1
      JF320681.1
      DN191011.1
      ASC24381_1
      FF682188.1
      CRC03895_1
      EX913981.1
      EV853685.1
      EX009057.1
      EX911686.1
      EX008716.1
      FK807892.1
      ES409001.1
      ES412699.1
      AS10543
      AM744578.1
      EX008970.1
      AJ275491
      ES411336.1
      FG979335.1
      CJC00028_2
  Experimental_info: Expr_pattern: Expr1084117
    Microarray_results: GPL14145_CJA18436_140-199_0.867_2_C
      GPL14145_CJA18436_536-595_0.600_5_B
      GPL14145_CJA18436_736-795_0.897_1_A
  Method: Gene