WormBase Tree Display for Gene: WBGene00020836
expand all nodes | collapse all nodes | view schema
| WBGene00020836 | SMap | S_parent | Sequence | T27A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lgc-34 | Person_evidence | WBPerson2536 | |||||
| WBPerson1430 | |||||||||
| Sequence_name | T27A1.4 | ||||||||
| Molecular_name | T27A1.4 | ||||||||
| T27A1.4.1 | |||||||||
| CE14211 | |||||||||
| Other_name | CELE_T27A1.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | lgc-34 | ||||||||
| DB_info | Database | AceView | gene | 2A819 | |||||
| WormQTL | gene | WBGene00020836 | |||||||
| WormFlux | gene | WBGene00020836 | |||||||
| NDB | locus_tag | CELE_T27A1.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020836|UniProtKB=O17274 | |||||||
| family | PTHR18945 | ||||||||
| NCBI | gene | 173443 | |||||||
| RefSeq | protein | NM_061351.7 | |||||||
| TREEFAM | TREEFAM_ID | TF316560 | |||||||
| TrEMBL | UniProtAcc | O17274 | |||||||
| UniProt_GCRP | UniProtAcc | O17274 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Jan 2008 14:49:34 | WBPerson2970 | Name_change | CGC_name | lgc-34 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lgc | ||||||||
| Allele (81) | |||||||||
| Strain | WBStrain00036379 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (100) | |||||||||
| Structured_description | Automated_description | Predicted to enable neurotransmitter receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Located in plasma membrane. Expressed in head and intestinal muscle. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T27A1.4 | |||||||
| Corresponding_transcript | T27A1.4.1 | ||||||||
| Other_sequence | Oden_isotig05491 | ||||||||
| Tcol_isotig22462 | |||||||||
| DI00138 | |||||||||
| EY467301.1 | |||||||||
| Tcol_isotig20167 | |||||||||
| FC551551.1 | |||||||||
| FC816201.1 | |||||||||
| FC817551.1 | |||||||||
| FC551044.1 | |||||||||
| JI461102.1 | |||||||||
| ACC31637_1 | |||||||||
| Dviv_isotig07383 | |||||||||
| JI174080.1 | |||||||||
| ACC06752_1 | |||||||||
| Dviv_isotig07382 | |||||||||
| PPC02943_1 | |||||||||
| WBC01993_1 | |||||||||
| CK850675.1 | |||||||||
| SRC00360_1 | |||||||||
| FC548015.1 | |||||||||
| OOC02935_1 | |||||||||
| DN556615.1 | |||||||||
| JO471825.1 | |||||||||
| EX545704.1 | |||||||||
| Acan_isotig13797 | |||||||||
| CJC02736_1 | |||||||||
| EX539332.1 | |||||||||
| EY470015.1 | |||||||||
| EX535901.1 | |||||||||
| EX542221.1 | |||||||||
| Oden_isotig05493 | |||||||||
| LSC00048_1 | |||||||||
| JI468586.1 | |||||||||
| EY466278.1 | |||||||||
| EX541225.1 | |||||||||
| Acan_isotig09733 | |||||||||
| EX544660.1 | |||||||||
| Tcol_isotig20197 | |||||||||
| EX545350.1 | |||||||||
| JI463919.1 | |||||||||
| Oden_isotig05492 | |||||||||
| EX535555.1 | |||||||||
| ACC06250_1 | |||||||||
| EY471260.1 | |||||||||
| ACC32418_1 | |||||||||
| JI462987.1 | |||||||||
| EX563627.1 | |||||||||
| AJ581674.1 | |||||||||
| EX535023.1 | |||||||||
| FC810755.1 | |||||||||
| JI171383.1 | |||||||||
| EX560330.1 | |||||||||
| ACC28281_1 | |||||||||
| Hbac_isotig02197 | |||||||||
| FC814971.1 | |||||||||
| BMC00073_1 | |||||||||
| CBC11547_1 | |||||||||
| Associated_feature | WBsf643910 | ||||||||
| WBsf643911 | |||||||||
| WBsf657278 | |||||||||
| WBsf986430 | |||||||||
| WBsf1011407 | |||||||||
| WBsf220764 | |||||||||
| Experimental_info (7) | |||||||||
| Map_info | Map | II | Position | -15.5959 | Error | 0.000164 | |||
| Positive | Positive_clone | T27A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024647 | ||||||||
| WBPaper00031006 | |||||||||
| WBPaper00031536 | |||||||||
| WBPaper00038444 | |||||||||
| WBPaper00052900 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
