WormBase Tree Display for Gene: WBGene00020051
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WBGene00020051 | SMap | S_parent | Sequence | R13A5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | mfsd | |||||
Allele (51) | ||||||
Strain | WBStrain00002242 | |||||
WBStrain00002243 | ||||||
WBStrain00037476 | ||||||
WBStrain00051064 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00089769 | |||||
00089770 | ||||||
00089771 | ||||||
00089772 | ||||||
00089773 | ||||||
00089774 | ||||||
Ortholog (38) | ||||||
Structured_description | Automated_description | Acts upstream of or within with a positive effect on synaptic vesicle exocytosis. Located in synaptic vesicle. Is an ortholog of human MFSD6 (major facilitator superfamily domain containing 6). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | R13A5.9 | ||||
Corresponding_transcript | R13A5.9.1 | |||||
Other_sequence | RSC02992_1 | |||||
Dviv_isotig05964 | ||||||
SSC05279_1 | ||||||
HG01236 | ||||||
EY471917.1 | ||||||
FC540261.1 | ||||||
SS00468 | ||||||
PPC18768_1 | ||||||
Dviv_isotig05963 | ||||||
Dviv_isotig05966 | ||||||
EY458943.1 | ||||||
Acan_isotig09375 | ||||||
Dviv_isotig05962 | ||||||
HG09002 | ||||||
HGC03749_1 | ||||||
EX827645.1 | ||||||
Dviv_isotig05965 | ||||||
EX827642.1 | ||||||
Acan_isotig16865 | ||||||
RS07114 | ||||||
Dviv_isotig28256 | ||||||
ACC03366_1 | ||||||
FC541483.1 | ||||||
ACC20395_1 | ||||||
FC542866.1 | ||||||
EY468916.1 | ||||||
EX827928.1 | ||||||
JI167033.1 | ||||||
FC546723.1 | ||||||
Associated_feature | WBsf667089 | |||||
WBsf716548 | ||||||
WBsf993045 | ||||||
WBsf993046 | ||||||
WBsf1015255 | ||||||
WBsf1015256 | ||||||
WBsf227004 | ||||||
WBsf227005 | ||||||
Experimental_info | RNAi_result | WBRNAi00005430 | Inferred_automatically | RNAi_primary | ||
WBRNAi00034920 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00051898 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00001226 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00017822 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00095700 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern (11) | ||||||
Drives_construct | WBCnstr00002969 | |||||
WBCnstr00002970 | ||||||
WBCnstr00004480 | ||||||
WBCnstr00020814 | ||||||
WBCnstr00025400 | ||||||
Construct_product | WBCnstr00020814 | |||||
WBCnstr00025400 | ||||||
Microarray_results (18) | ||||||
Expression_cluster (188) | ||||||
Interaction (11) | ||||||
Map_info | Map | III | Position | -0.664155 | ||
Positive | Positive_clone | R13A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00046944 | ||||||
WBPaper00050231 | ||||||
WBPaper00051175 | ||||||
WBPaper00055090 | ||||||
WBPaper00055785 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |