WormBase Tree Display for Gene: WBGene00019803
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WBGene00019803 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | PDB1.1 | |||||||
Molecular_name | PDB1.1a | ||||||||
PDB1.1a.1 | |||||||||
CE31209 | |||||||||
PDB1.1b | |||||||||
CE39603 | |||||||||
PDB1.1c | |||||||||
CE39604 | |||||||||
PDB1.1b.1 | |||||||||
PDB1.1c.1 | |||||||||
Other_name | CELE_PDB1.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | PDB1.1 | ||||||||
DB_info | Database | WormQTL | gene | WBGene00019803 | |||||
WormFlux | gene | WBGene00019803 | |||||||
NDB | locus_tag | CELE_PDB1.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019803|UniProtKB=H2KZN1 | |||||||
family | PTHR43840 | ||||||||
NCBI | gene | 181016 | |||||||
RefSeq | protein | NM_001047812.7 | |||||||
NM_001047811.2 | |||||||||
NM_001047813.4 | |||||||||
TREEFAM | TREEFAM_ID | TF317380 | |||||||
TrEMBL | UniProtAcc | H2KZN1 | |||||||
Q2L6X4 | |||||||||
Q2L6X5 | |||||||||
UniProt_GCRP | UniProtAcc | H2KZN1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (43) | |||||||||
Strain | WBStrain00032969 | ||||||||
WBStrain00033006 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (25) | |||||||||
Paralog | WBGene00010644 | Caenorhabditis elegans | From_analysis (3) | ||||||
WBGene00018280 | Caenorhabditis elegans | From_analysis (2) | |||||||
WBGene00018948 | Caenorhabditis elegans | From_analysis (3) | |||||||
WBGene00044481 | Caenorhabditis elegans | From_analysis (3) | |||||||
WBGene00019841 | Caenorhabditis elegans | From_analysis (3) | |||||||
WBGene00000393 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00006590 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00011821 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00012712 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00013668 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable monoatomic cation transmembrane transporter activity. Involved in innate immune response. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PDB1.1a | |||||||
PDB1.1b | |||||||||
PDB1.1c | |||||||||
Corresponding_CDS_history | PDB1.1:wp153 | ||||||||
Corresponding_transcript | PDB1.1a.1 | ||||||||
PDB1.1b.1 | |||||||||
PDB1.1c.1 | |||||||||
Other_sequence | AS01434 | ||||||||
AS05416 | |||||||||
CJC13378_1 | |||||||||
ASC06707_1 | |||||||||
Tcir_isotig29690 | |||||||||
JO469359.1 | |||||||||
Acan_isotig10162 | |||||||||
Oden_isotig28610 | |||||||||
Oden_isotig27461 | |||||||||
JI174572.1 | |||||||||
Oden_isotig20265 | |||||||||
Oden_isotig20423 | |||||||||
EX553073.1 | |||||||||
Associated_feature | WBsf654147 | ||||||||
WBsf670739 | |||||||||
WBsf237595 | |||||||||
Experimental_info | RNAi_result | WBRNAi00070103 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051083 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017287 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034505 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016981 | ||||||||
Expr1038575 | |||||||||
Expr1154794 | |||||||||
Expr2005295 | |||||||||
Expr2023515 | |||||||||
Drives_construct | WBCnstr00025587 | ||||||||
Construct_product | WBCnstr00025587 | ||||||||
Microarray_results (32) | |||||||||
Expression_cluster (186) | |||||||||
Interaction (29) | |||||||||
Map_info | Positive | Positive_clone | PDB1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | -1.59696 | |||||||
Method | Gene |