WormBase Tree Display for Gene: WBGene00018682
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WBGene00018682 | SMap | S_parent | Sequence | F52D1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | aagr-4 | Paper_evidence | WBPaper00036069 | |||||
Person_evidence | WBPerson344 | ||||||||
Sequence_name | F52D1.1 | ||||||||
Molecular_name | F52D1.1 | ||||||||
F52D1.1.1 | |||||||||
CE38522 | |||||||||
Other_name | CELE_F52D1.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | aagr-4 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 16 Apr 2010 14:03:06 | WBPerson2970 | Name_change | CGC_name | aagr-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | aagr | ||||||||
Allele (83) | |||||||||
Strain | WBStrain00032006 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00029649 | ||||||||
00029650 | |||||||||
00029651 | |||||||||
00029652 | |||||||||
00029653 | |||||||||
00029654 | |||||||||
00123741 | |||||||||
00123742 | |||||||||
00123743 | |||||||||
00123744 | |||||||||
Ortholog (41) | |||||||||
Paralog | WBGene00009583 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00017071 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00019895 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable alpha-glucosidase activity. Predicted to be involved in N-glycan processing. Human ortholog(s) of this gene implicated in polycystic kidney disease 3 and polycystic liver disease. Is an ortholog of human GANAB (glucosidase II alpha subunit) and GANC (glucosidase alpha, neutral C). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0080322 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4138) | ||||
DOID:0110860 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4138) | ||||||
DOID:0050770 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4138) | ||||||
Molecular_info | Corresponding_CDS | F52D1.1 | |||||||
Corresponding_CDS_history | F52D1.1:wp133 | ||||||||
F52D1.1:wp142 | |||||||||
Corresponding_transcript | F52D1.1.1 | ||||||||
Other_sequence | SS02123 | ||||||||
Tcir_isotig29005 | |||||||||
CRC01840_1 | |||||||||
SR02411 | |||||||||
RSC01921_1 | |||||||||
CR00347 | |||||||||
Acan_isotig09174 | |||||||||
Hbac_isotig05337 | |||||||||
Dviv_isotig21695 | |||||||||
Dviv_isotig19740 | |||||||||
EX565878.1 | |||||||||
SSC00762_1 | |||||||||
JO469251.1 | |||||||||
CJC02068_1 | |||||||||
SRC03948_1 | |||||||||
ACC26832_1 | |||||||||
Dviv_isotig19741 | |||||||||
EY473754.1 | |||||||||
JI165806.1 | |||||||||
GO251066.1 | |||||||||
MHC00239_1 | |||||||||
ACC16845_1 | |||||||||
Oden_isotig18629 | |||||||||
Dviv_isotig21694 | |||||||||
JI165484.1 | |||||||||
RS08255 | |||||||||
GW411842.1 | |||||||||
HBC08538_1 | |||||||||
GR979148.1 | |||||||||
SC01582 | |||||||||
Acan_isotig19703 | |||||||||
PPC08466_1 | |||||||||
Hbac_isotig07682 | |||||||||
MH01397 | |||||||||
XI01809 | |||||||||
CB037252.1 | |||||||||
EX011432.1 | |||||||||
PSC00728_1 | |||||||||
BXC00924_1 | |||||||||
CJC06460_1 | |||||||||
Tcol_isotig18438 | |||||||||
BXC03179_1 | |||||||||
TDC01563_1 | |||||||||
Associated_feature (14) | |||||||||
Experimental_info | RNAi_result | WBRNAi00076459 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015391 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00047958 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023843 | ||||||||
Expr1038043 | |||||||||
Expr1151777 | |||||||||
Expr2009051 | |||||||||
Expr2027287 | |||||||||
Drives_construct | WBCnstr00026343 | ||||||||
Construct_product | WBCnstr00026343 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (252) | |||||||||
Interaction (22) | |||||||||
Map_info | Map | X | Position | -19.8285 | Error | 0.029833 | |||
Positive | Positive_clone | F52D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (5) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |