WormBase Tree Display for Gene: WBGene00017678
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| WBGene00017678 | SMap | S_parent | Sequence | F21F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | asp-12 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F21F8.4 | ||||||||
| Molecular_name | F21F8.4 | ||||||||
| F21F8.4.1 | |||||||||
| CE09540 | |||||||||
| F21F8.4.2 | |||||||||
| Other_name | CELE_F21F8.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | asp-12 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 23 Nov 2012 14:10:21 | WBPerson2970 | Name_change | CGC_name | asp-12 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | asp | ||||||||
| Allele (42) | |||||||||
| Strain | WBStrain00055352 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024932 | ||||||||
| 00024933 | |||||||||
| 00024934 | |||||||||
| 00024935 | |||||||||
| 00024936 | |||||||||
| 00024937 | |||||||||
| 00024938 | |||||||||
| 00024939 | |||||||||
| 00122998 | |||||||||
| 00122999 | |||||||||
| Contained_in_operon | CEOP5539 | ||||||||
| Ortholog (32) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Involved in innate immune response. Predicted to be located in lysosome. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); chronic fatigue syndrome; and congenital adrenal hyperplasia. Is an ortholog of human REN (renin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (17) | ||||||||
| Molecular_info | Corresponding_CDS | F21F8.4 | |||||||
| Corresponding_transcript | F21F8.4.1 | ||||||||
| F21F8.4.2 | |||||||||
| Other_sequence | SR04737 | ||||||||
| JO475852.1 | |||||||||
| GW411840.1 | |||||||||
| PSC03735_1 | |||||||||
| Oden_isotig03607 | |||||||||
| AS09479 | |||||||||
| ASC06299_1 | |||||||||
| AS05396 | |||||||||
| AS05699 | |||||||||
| Oden_isotig03601 | |||||||||
| FC812440.1 | |||||||||
| Oden_isotig03606 | |||||||||
| Oden_isotig03611 | |||||||||
| HC08625 | |||||||||
| TVC00230_1 | |||||||||
| AS15797 | |||||||||
| GW412468.1 | |||||||||
| XI05506 | |||||||||
| Oden_isotig03605 | |||||||||
| AS05226 | |||||||||
| FE916896.1 | |||||||||
| SR01838 | |||||||||
| SRC03441_1 | |||||||||
| GW408680.1 | |||||||||
| AM744151.1 | |||||||||
| Acan_isotig06083 | |||||||||
| AS05456 | |||||||||
| GR978100.1 | |||||||||
| HC01344 | |||||||||
| ALC01079_1 | |||||||||
| AS02056 | |||||||||
| Name_isotig00763 | |||||||||
| Oden_isotig03604 | |||||||||
| CR12374 | |||||||||
| ASC02358_1 | |||||||||
| GW411128.1 | |||||||||
| Oden_isotig03600 | |||||||||
| Name_isotig05352 | |||||||||
| ACC09030_1 | |||||||||
| HCC10668_1 | |||||||||
| Oden_isotig03608 | |||||||||
| Oden_isotig03609 | |||||||||
| HC03454 | |||||||||
| AM744231.1 | |||||||||
| AM744603.1 | |||||||||
| Acan_isotig06082 | |||||||||
| HCC12577_1 | |||||||||
| HCC00039_1 | |||||||||
| FC818089.1 | |||||||||
| ASC00750_2 | |||||||||
| HC09756 | |||||||||
| BQ833963.2 | |||||||||
| TDC02584_1 | |||||||||
| FE916990.1 | |||||||||
| Name_isotig00762 | |||||||||
| Oden_isotig03602 | |||||||||
| AM744129.1 | |||||||||
| TV00194 | |||||||||
| PSC01465 | |||||||||
| AM744554.1 | |||||||||
| Oden_isotig03603 | |||||||||
| FC819197.1 | |||||||||
| Tcol_isotig15040 | |||||||||
| Acan_isotig10970 | |||||||||
| GW407688.1 | |||||||||
| OOC00497_1 | |||||||||
| HCC01338_1 | |||||||||
| SRC05109_1 | |||||||||
| Oden_isotig03610 | |||||||||
| Associated_feature | WBsf646997 | ||||||||
| WBsf1000612 | |||||||||
| WBsf232088 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045230 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045229 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013693 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115183 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089050 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076325 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (3) | |||||||||
| Drives_construct | WBCnstr00027108 | ||||||||
| Construct_product | WBCnstr00027108 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (338) | |||||||||
| Interaction (32) | |||||||||
| Map_info | Map | V | Position | 1.26094 | |||||
| Positive | Positive_clone | F21F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028482 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060662 | |||||||||
| WBPaper00062322 | |||||||||
| WBPaper00064284 | |||||||||
| WBPaper00064728 | |||||||||
| WBPaper00064841 | |||||||||
| WBPaper00065681 | |||||||||
| WBPaper00065877 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
