WormBase Tree Display for Gene: WBGene00017012
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WBGene00017012 | SMap | S_parent | Sequence | D1009 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | acs-22 | Person_evidence | WBPerson237 | |||||
WBPerson9275 | |||||||||
Sequence_name | D1009.1 | ||||||||
Molecular_name | D1009.1a | ||||||||
D1009.1a.1 | |||||||||
CE04285 | |||||||||
D1009.1c | |||||||||
CE51329 | |||||||||
D1009.1d | |||||||||
CE51246 | |||||||||
D1009.1c.1 | |||||||||
D1009.1d.1 | |||||||||
Other_name | CELE_D1009.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | acs-22 | ||||||||
DB_info | Database | AceView | gene | XJ557 | |||||
WormQTL | gene | WBGene00017012 | |||||||
WormFlux | gene | WBGene00017012 | |||||||
NDB | locus_tag | CELE_D1009.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017012|UniProtKB=Q18916 | |||||||
family | PTHR43107 | ||||||||
NCBI | gene | 181138 | |||||||
RefSeq | protein | NM_001392815.1 | |||||||
NM_001322629.4 | |||||||||
NM_077108.6 | |||||||||
TrEMBL | UniProtAcc | Q18916 | |||||||
A0A131MBB2 | |||||||||
A0A131MB92 | |||||||||
UniProt_GCRP | UniProtAcc | Q18916 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 13 Mar 2009 14:10:25 | WBPerson9133 | Name_change | CGC_name | acs-22 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | acs | ||||||||
Allele (144) | |||||||||
Strain | WBStrain00004763 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00001951 | ||||||||
00001952 | |||||||||
00001953 | |||||||||
00001954 | |||||||||
00001955 | |||||||||
00001956 | |||||||||
00001957 | |||||||||
00062816 | |||||||||
Ortholog (44) | |||||||||
Paralog (17) | |||||||||
Structured_description | Concise_description | acs-22 encodes a protein homologous to the mammalian FATP1 and FATP4 fatty acid transport proteins (FATP)/very long chain fatty acid acyl-CoA synthetases; acs-22 functions redundantly with acs-20 to regulate formation of the cuticle surface barrier that prevents penetration of small molecules; acs-22 may affect cuticle development via its role in incorporation of very long chain fatty acids, but not other fatty acids, into sphingomyelin; an acs-22::gfp promoter fusion is expressed strongly in the intestine, with weaker expression seen in the pharynx, head neurons, and hypodermis. | Paper_evidence | WBPaper00035868 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 03 Feb 2010 00:00:00 | ||||||||
Automated_description | Predicted to enable long-chain fatty acid transporter activity and long-chain fatty acid-CoA ligase activity. Predicted to be involved in triglyceride homeostasis. Located in endoplasmic reticulum. Expressed in head neurons; hypodermis; and pharynx. Human ortholog(s) of this gene implicated in obesity. Is an ortholog of human SLC27A1 (solute carrier family 27 member 1) and SLC27A4 (solute carrier family 27 member 4). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:9970 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10998) | ||||
Molecular_info | Corresponding_CDS | D1009.1a | |||||||
D1009.1c | |||||||||
D1009.1d | |||||||||
Corresponding_CDS_history | D1009.1b:wp271 | ||||||||
Corresponding_transcript | D1009.1a.1 | ||||||||
D1009.1c.1 | |||||||||
D1009.1d.1 | |||||||||
Other_sequence | TM02342 | ||||||||
Tcir_isotig05129 | |||||||||
SC00737 | |||||||||
CR05340 | |||||||||
FC814726.1 | |||||||||
TMC04842_1 | |||||||||
CJC00658_1 | |||||||||
FC809572.1 | |||||||||
ES743013.1 | |||||||||
BXC03430_1 | |||||||||
CJC02075_1 | |||||||||
XI04921 | |||||||||
CBC01748_1 | |||||||||
GR978819.1 | |||||||||
BXC02424_1 | |||||||||
BUC01790_1 | |||||||||
XIC05561_1 | |||||||||
CRC00938_1 | |||||||||
Tcol_isotig15503 | |||||||||
Tcol_isotig14500 | |||||||||
FG973722.1 | |||||||||
CR04919 | |||||||||
CR01750 | |||||||||
EX912575.1 | |||||||||
Tcol_isotig18040 | |||||||||
FC809442.1 | |||||||||
CJC14484_1 | |||||||||
FC814873.1 | |||||||||
Hbac_isotig06278 | |||||||||
SR00453 | |||||||||
SSC01821_1 | |||||||||
CJC04390_1 | |||||||||
Oden_isotig13885 | |||||||||
HG04826 | |||||||||
BF482081.1 | |||||||||
CRC07562_1 | |||||||||
HBC05827_1 | |||||||||
Dviv_isotig35130 | |||||||||
BXC02385_1 | |||||||||
BXC02058_1 | |||||||||
PT02660 | |||||||||
SRC00266_1 | |||||||||
Oden_isotig13884 | |||||||||
Oden_isotig13883 | |||||||||
HGC11793_1 | |||||||||
JI168627.1 | |||||||||
Tcol_isotig14962 | |||||||||
PTC02184_1 | |||||||||
HBC06211_1 | |||||||||
SS01081 | |||||||||
Acan_isotig16771 | |||||||||
OVC03661_1 | |||||||||
Associated_feature (16) | |||||||||
Experimental_info (7) | |||||||||
Map_info | Map | X | Position | 0.449566 | Error | 0.000197 | |||
Positive | Positive_clone | D1009 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (15) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |