WormBase Tree Display for Gene: WBGene00015567
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WBGene00015567 | SMap | S_parent | Sequence | C07D10 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | bath | ||||||
Allele (33) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00021687 | ||||||
00021688 | |||||||
00021689 | |||||||
00021690 | |||||||
00021691 | |||||||
00021692 | |||||||
Ortholog (40) | |||||||
Paralog | WBGene00003209 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WBGene00011815 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WBGene00016803 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00018137 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00007778 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00009820 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00018946 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | The C07D10.2 gene encodes a protein with a meprin-associated Traf homology (MATH) domain that may be involved in apoptosis. | Paper_evidence | WBPaper00004589 | |||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and regulation of proteolysis. Predicted to be located in cytoplasm and nucleus. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C07D10.2a | |||||
C07D10.2b | |||||||
Corresponding_transcript | C07D10.2a.1 | ||||||
C07D10.2b.1 | |||||||
Other_sequence | CR11698 | ||||||
BUC02129_1 | |||||||
GRC05835_1 | |||||||
JI181718.1 | |||||||
MCC00164_1 | |||||||
CRC09183_1 | |||||||
AI124159.1 | |||||||
PPC11636_1 | |||||||
CR07179 | |||||||
CBC15730_1 | |||||||
JI170319.1 | |||||||
Oden_isotig28841 | |||||||
OVC01871_1 | |||||||
Oden_isotig19904 | |||||||
CR11699 | |||||||
JI468894.1 | |||||||
CRC00505_1 | |||||||
CBC01374_1 | |||||||
BF118510.1 | |||||||
AY705928.1 | |||||||
BMC09093_1 | |||||||
MC00135 | |||||||
BXC07301_1 | |||||||
GR10923 | |||||||
Associated_feature (17) | |||||||
Experimental_info | RNAi_result | WBRNAi00088608 | Inferred_automatically | RNAi_primary | |||
WBRNAi00082914 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00000582 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039990 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010379 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00085655 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00088715 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr413 | ||||||
Expr1012215 | |||||||
Expr1036668 | |||||||
Expr1144069 | |||||||
Expr2009561 | |||||||
Expr2027798 | |||||||
Drives_construct | WBCnstr00028745 | ||||||
Construct_product | WBCnstr00028745 | ||||||
Microarray_results (31) | |||||||
Expression_cluster (117) | |||||||
Interaction (48) | |||||||
Map_info | Map | II | Position | 0.502905 | Error | 1.5e-05 | |
Positive | Positive_clone | C07D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00035598 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |