WormBase Tree Display for Gene: WBGene00018946
expand all nodes | collapse all nodes | view schema
| WBGene00018946 | SMap | S_parent | Sequence | F56C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F56C3.9 | |||||||
| Molecular_name | F56C3.9 | ||||||||
| F56C3.9.1 | |||||||||
| CE17900 | |||||||||
| Other_name | CELE_F56C3.9 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F56C3.9 | ||||||||
| DB_info | Database | AceView | gene | XC8 | |||||
| WormQTL | gene | WBGene00018946 | |||||||
| WormFlux | gene | WBGene00018946 | |||||||
| NDB | locus_tag | CELE_F56C3.9 | |||||||
| NCBI | gene | 186367 | |||||||
| RefSeq | protein | NM_075857.8 | |||||||
| TREEFAM | TREEFAM_ID | TF317616 | |||||||
| TrEMBL | UniProtAcc | O61761 | |||||||
| UniProt_GCRP | UniProtAcc | O61761 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog | WBGene00009820 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007778 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015567 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018137 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is affected by several genes including daf-16; skn-1; and daf-12 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty-two chemicals including hydrogen sulfide; Mercuric Chloride; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56C3.9 | |||||||
| Corresponding_transcript | F56C3.9.1 | ||||||||
| Other_sequence | Tcir_isotig14786 | ||||||||
| Tcir_isotig13225 | |||||||||
| Associated_feature | WBsf716845 | ||||||||
| WBsf237014 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00070093 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048664 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015796 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032942 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023242 | ||||||||
| Expr1152426 | |||||||||
| Expr2004280 | |||||||||
| Expr2022504 | |||||||||
| Drives_construct | WBCnstr00026173 | ||||||||
| Construct_product | WBCnstr00026173 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (205) | |||||||||
| Interaction | WBInteraction000258882 | ||||||||
| WBInteraction000374506 | |||||||||
| WBInteraction000387320 | |||||||||
| WBInteraction000406196 | |||||||||
| WBInteraction000544275 | |||||||||
| WBInteraction000545952 | |||||||||
| WBInteraction000560252 | |||||||||
| Map_info | Positive | Positive_clone | F56C3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -18.1796 | |||||||
| Method | Gene |
