WormBase Tree Display for Gene: WBGene00015099

WBGene00015099 SMap: S_parent: Sequence: B0280
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: ggtb
    Allele (40)
    Strain: WBStrain00001303
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (36)
    Paralog: WBGene00006465 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00013002 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable small GTPase binding activity and zinc ion binding activity. Predicted to contribute to Rab geranylgeranyltransferase activity. Involved in PERK-mediated unfolded protein response. Predicted to be part of Rab-protein geranylgeranyltransferase complex. Expressed in head; intestine; and tail. Is an ortholog of human RABGGTB (Rab geranylgeranyltransferase subunit beta). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0280.1a
      B0280.1b
    Corresponding_CDS_history: B0280.1b:wp151
    Corresponding_transcript: B0280.1a.1
      B0280.1b.1
      B0280.1b.2
    Other_sequence: MAC01166_1
      MA01849
      EX536508.1
      Dviv_isotig08981
      TSC12090_1
      EX013080.1
      EX558979.1
      Name_isotig03719
      GR19627
      AYC03317_1
      GR11603
      EW741149.1
      EX560929.1
      MH00419
      Tcol_isotig20320
      MHC09790_1
      HG04203
      GRC02990_1
      HS00150
      Dviv_isotig08982
      MH04399
      MHC07382_1
      GPC01439_1
      ES568535.1
      ES562904.1
      ACC01988_1
      EX540950.1
      MH10685
      CRC10428_1
      GRC04311_1
      Tcir_isotig07767
      Name_isotig09128
      HGC05837_1
      HG03987
      JI169009.1
      Dviv_isotig08984
      Name_isotig07707
      MHC02575_1
      EX549664.1
      CBC07985_1
      JO470562.1
      HSC00457_1
      Dviv_isotig08983
      MH00480
      Oden_isotig20704
      Acan_isotig10073
      EX552207.1
      PPC07270_1
      MH04251
      MH00892
      MHC07378_1
      HG08132
      HBC02284_1
      AE03582
    Associated_feature: WBsf645319
      WBsf225199
  Experimental_info: RNAi_result (25)
    Expr_pattern: Chronogram1088
      Expr90
      Expr5033
      Expr1021670
      Expr1036451
      Expr1143036
      Expr2012036
      Expr2030272
    Drives_construct: WBCnstr00002196
      WBCnstr00029088
    Construct_product: WBCnstr00029088
    Microarray_results (32)
    Expression_cluster (117)
    Interaction (20)
  Map_info: Map: III Position: -0.787736 Error: 0.0003
    Positive: Positive_clone: B0280 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00018228
    WBPaper00030935
    WBPaper00038491
    WBPaper00055090
    WBPaper00059604
    WBPaper00064071
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene