WormBase Tree Display for Gene: WBGene00011906
expand all nodes | collapse all nodes | view schema
| WBGene00011906 | SMap | S_parent | Sequence | T22A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hsp-12.1 | Person_evidence | WBPerson36 | |||||
| Sequence_name | T22A3.2 | ||||||||
| Molecular_name | T22A3.2a | ||||||||
| T22A3.2a.1 | |||||||||
| CE13914 | |||||||||
| T22A3.2b | |||||||||
| CE40519 | |||||||||
| T22A3.2b.1 | |||||||||
| Other_name | CELE_T22A3.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | hsp-12.1 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00011906 | |||||
| WormFlux | gene | WBGene00011906 | |||||||
| NDB | locus_tag | CELE_T22A3.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011906|UniProtKB=G5EE65 | |||||||
| family | PTHR45640 | ||||||||
| NCBI | gene | 188710 | |||||||
| RefSeq | protein | NM_001083144.2 | |||||||
| NM_001083145.4 | |||||||||
| TrEMBL | UniProtAcc | G5EE65 | |||||||
| O01263 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EE65 | |||||||
| OMIM | gene | 123580 | |||||||
| 123590 | |||||||||
| 602195 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 Jul 2004 13:52:33 | WBPerson1971 | Name_change | CGC_name | hsp-12.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hsp | ||||||||
| Allele (21) | |||||||||
| Strain | WBStrain00033275 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00015479 | ||||||||
| 00015480 | |||||||||
| 00015481 | |||||||||
| 00015482 | |||||||||
| 00015483 | |||||||||
| 00015484 | |||||||||
| 00015485 | |||||||||
| Ortholog (46) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Concise_description | hsp-12.1 encodes a member of the small heat shock family of proteins. | Paper_evidence | WBPaper00013029 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 02 Mar 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable unfolded protein binding activity. Predicted to be involved in protein refolding and response to heat. Located in striated muscle dense body. Expressed in body wall musculature. Human ortholog(s) of this gene implicated in several diseases, including Charcot-Marie-Tooth disease axonal type 2F; cataract (multiple); and myofibrillar myopathy (multiple). Is an ortholog of human CRYAA (crystallin alpha A); CRYAB (crystallin alpha B); and HSPB6 (heat shock protein family B (small) member 6). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (11) | ||||||||
| Molecular_info | Corresponding_CDS (2) | ||||||||
| Corresponding_transcript | T22A3.2a.1 | ||||||||
| T22A3.2b.1 | |||||||||
| Other_sequence | FG619378.1 | ||||||||
| MI01124 | |||||||||
| MI04039 | |||||||||
| FG619497.1 | |||||||||
| XI01250 | |||||||||
| FG619499.1 | |||||||||
| XI00110 | |||||||||
| ASC00177_1 | |||||||||
| FG619483.1 | |||||||||
| XIC00008_1 | |||||||||
| JI215767.1 | |||||||||
| FG619467.1 | |||||||||
| XI00113 | |||||||||
| FG619509.1 | |||||||||
| RSC03934_1 | |||||||||
| XI01055 | |||||||||
| FG619351.1 | |||||||||
| TX00528 | |||||||||
| MJC04657_1 | |||||||||
| MH00627 | |||||||||
| MI02651 | |||||||||
| XI00118 | |||||||||
| CN477965.1 | |||||||||
| PTC04428_1 | |||||||||
| XIC00705_1 | |||||||||
| FG619486.1 | |||||||||
| MIC00522_1 | |||||||||
| TCC00429_1 | |||||||||
| FG619465.1 | |||||||||
| FG619474.1 | |||||||||
| XI00132 | |||||||||
| XI00063 | |||||||||
| MHC01208_1 | |||||||||
| BXC04219_1 | |||||||||
| FG619498.1 | |||||||||
| RSC04467_1 | |||||||||
| XI02093 | |||||||||
| RS11386 | |||||||||
| MJC00040_1 | |||||||||
| FG619478.1 | |||||||||
| MI00454 | |||||||||
| MJC00040_2 | |||||||||
| XI01296 | |||||||||
| PT04899 | |||||||||
| XIC00848_1 | |||||||||
| MAC01324_1 | |||||||||
| XI01287 | |||||||||
| BUC00860_1 | |||||||||
| XI02310 | |||||||||
| FG619396.1 | |||||||||
| AS02704 | |||||||||
| MJ00843 | |||||||||
| AS01410 | |||||||||
| FG619496.1 | |||||||||
| XI00809 | |||||||||
| MP00626 | |||||||||
| FG619501.1 | |||||||||
| JO473342.1 | |||||||||
| ALC00221_1 | |||||||||
| CJC14150_1 | |||||||||
| XI00097 | |||||||||
| RS05873 | |||||||||
| XI00103 | |||||||||
| ASC17546_1 | |||||||||
| PT04465 | |||||||||
| ASC17449_1 | |||||||||
| CN477412.1 | |||||||||
| MPC00399_1 | |||||||||
| BU585661.1 | |||||||||
| FG619482.1 | |||||||||
| XI00108 | |||||||||
| CN477974.1 | |||||||||
| FG619473.1 | |||||||||
| MP01693 | |||||||||
| FG619512.1 | |||||||||
| FG619479.1 | |||||||||
| FG619415.1 | |||||||||
| XI00078 | |||||||||
| MIC00522_2 | |||||||||
| FG619513.1 | |||||||||
| MI00049 | |||||||||
| MA01997 | |||||||||
| Associated_feature | WBsf655318 | ||||||||
| WBsf985040 | |||||||||
| WBsf220257 | |||||||||
| WBsf220258 | |||||||||
| WBsf220259 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00116981 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035777 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053771 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076696 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106376 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004252 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9395 | ||||||||
| Expr15506 | |||||||||
| Expr1021401 | |||||||||
| Expr1035252 | |||||||||
| Expr1157322 | |||||||||
| Expr2012612 | |||||||||
| Expr2030848 | |||||||||
| Drives_construct | WBCnstr00030294 | ||||||||
| WBCnstr00042197 | |||||||||
| Construct_product | WBCnstr00013960 | ||||||||
| WBCnstr00030294 | |||||||||
| WBCnstr00042197 | |||||||||
| Antibody | WBAntibody00003010 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction (48) | |||||||||
| Map_info | Map | I | Position | 5.05599 | Error | 6.2e-05 | |||
| Positive | Positive_clone | T22A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
