WormBase Tree Display for Gene: WBGene00007880
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| WBGene00007880 | SMap | S_parent | Sequence | C33A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ndua-5 | Person_evidence | WBPerson25803 | |||||
| WBPerson545 | |||||||||
| Sequence_name | C33A12.1 | ||||||||
| Molecular_name | C33A12.1 | ||||||||
| C33A12.1.1 | |||||||||
| CE05347 | |||||||||
| Other_name | CELE_C33A12.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ndua-5 | ||||||||
| DB_info | Database | AceView | gene | 4K286 | |||||
| WormQTL | gene | WBGene00007880 | |||||||
| WormFlux | gene | WBGene00007880 | |||||||
| NDB | locus_tag | CELE_C33A12.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007880|UniProtKB=Q18359 | |||||||
| family | PTHR12653 | ||||||||
| NCBI | gene | 177786 | |||||||
| RefSeq | protein | NM_069287.6 | |||||||
| SwissProt | UniProtAcc | Q18359 | |||||||
| TREEFAM | TREEFAM_ID | TF313785 | |||||||
| UniProt_GCRP | UniProtAcc | Q18359 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | ndua-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ndua | ||||||||
| Allele (23) | |||||||||
| Strain | WBStrain00002888 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061016 | ||||||||
| 00061017 | |||||||||
| 00061018 | |||||||||
| 00061019 | |||||||||
| 00061020 | |||||||||
| 00061021 | |||||||||
| 00061022 | |||||||||
| 00061023 | |||||||||
| 00061024 | |||||||||
| 00115881 | |||||||||
| Ortholog (37) | |||||||||
| Structured_description | Concise_description | C33A12.1 encodes the C. elegans ortholog of the NDUFA5/B13 subunit of the mitochondrial NADH dehydrogenase (ubiquinone) complex (complex I). | Paper_evidence | WBPaper00005928 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 07 Nov 2006 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in respiratory electron transport chain. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in Alzheimer's disease. Is an ortholog of human NDUFA5 (NADH:ubiquinone oxidoreductase subunit A5). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed (2) | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7688) | ||||
| Molecular_info | Corresponding_CDS | C33A12.1 | |||||||
| Corresponding_transcript | C33A12.1.1 | ||||||||
| Other_sequence | CSC02293_1 | ||||||||
| Oden_isotig13435 | |||||||||
| BMC04790_1 | |||||||||
| CRC01734_1 | |||||||||
| CK855425.1 | |||||||||
| HCC02482_2 | |||||||||
| AE04594 | |||||||||
| JI178399.1 | |||||||||
| Name_isotig03346 | |||||||||
| CJC00019_1 | |||||||||
| NBC00725_2 | |||||||||
| HC04897 | |||||||||
| AA901431.1 | |||||||||
| Dviv_isotig25285 | |||||||||
| ACC01561_1 | |||||||||
| CV198674.1 | |||||||||
| NB06922 | |||||||||
| CGC00405_1 | |||||||||
| OVC00765_1 | |||||||||
| Tcol_isotig23465 | |||||||||
| Hbac_isotig05491 | |||||||||
| NBC00725_1 | |||||||||
| HBC02585_1 | |||||||||
| WBC01507_1 | |||||||||
| HG02474 | |||||||||
| JO468639.1 | |||||||||
| SSC02979_1 | |||||||||
| PP00790 | |||||||||
| ASC00969_1 | |||||||||
| CK850376.1 | |||||||||
| MA02918 | |||||||||
| PVC00010_1 | |||||||||
| CK726336.1 | |||||||||
| CK855484.1 | |||||||||
| Tcol_isotig10299 | |||||||||
| MAC02870_1 | |||||||||
| HC01907 | |||||||||
| Tcir_isotig15194 | |||||||||
| NB07331 | |||||||||
| HGC01826_1 | |||||||||
| BXC01726_1 | |||||||||
| Tcol_isotig10300 | |||||||||
| RSC00166_1 | |||||||||
| HCC02482_1 | |||||||||
| Tcir_isotig17033 | |||||||||
| MIC06889_1 | |||||||||
| AE04847 | |||||||||
| AS02580 | |||||||||
| FD515198.1 | |||||||||
| ACC02686_1 | |||||||||
| FE909809.1 | |||||||||
| Oden_isotig13434 | |||||||||
| MI02133 | |||||||||
| FE915794.1 | |||||||||
| SS00100 | |||||||||
| WBC02567_1 | |||||||||
| HCC06295_1 | |||||||||
| AYC02040_1 | |||||||||
| EX916496.1 | |||||||||
| MH09089 | |||||||||
| CBC00294_1 | |||||||||
| Associated_feature | WBsf652070 | ||||||||
| WBsf997432 | |||||||||
| WBsf997433 | |||||||||
| WBsf1017971 | |||||||||
| WBsf1017972 | |||||||||
| WBsf1017973 | |||||||||
| WBsf230585 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Chronogram1794 | ||||||||
| Expr5405 | |||||||||
| Expr1029208 | |||||||||
| Expr1033412 | |||||||||
| Expr1145739 | |||||||||
| Expr2001329 | |||||||||
| Expr2019552 | |||||||||
| Drives_construct | WBCnstr00003407 | ||||||||
| WBCnstr00033412 | |||||||||
| Construct_product | WBCnstr00033412 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (116) | |||||||||
| Interaction (103) | |||||||||
| Map_info | Map | IV | Position | 4.29053 | |||||
| Positive | Positive_clone | C33A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005928 | ||||||||
| WBPaper00031194 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
