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WormBase Tree Display for Gene: WBGene00004434

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Name Class

WBGene00004434SMapS_parentSequenceC27A2
IdentityVersion1
NameCGC_namerpl-22
Sequence_nameC27A2.2
Molecular_name (4)
Other_nameCELE_C27A2.2Accession_evidenceNDBBX284602
Public_namerpl-22
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:35WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpl
Allele (26)
Legacy_informationOrthologous to yeast (S.cerevisiae) ribosomal protein rpl22 using blastP
StrainWBStrain00054450
RNASeq_FPKM (74)
GO_annotation00047877
00047878
00047879
00047880
00047881
00112868
00112869
00112870
Ortholog (46)
Structured_descriptionConcise_descriptionrpl-22 encodes a large ribosomal subunit L22 protein; by homology, RPL-22 is predicted to function in protein biosynthesis; in C. elegans, RPL-22 activity is broadly required for embryonic and germline development, as well as normal body coloration, morphology, and postembryonic growth rates.Paper_evidenceWBPaper00005654
Curator_confirmedWBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in ribosome. Predicted to be part of ribonucleoprotein complex. Is an ortholog of human RPL22 (ribosomal protein L22).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC27A2.2a
Corresponding_CDS_historyC27A2.2b:wp248
Corresponding_transcriptC27A2.2b
C27A2.2a.1
Other_sequenceGRC00501_1
CJC08728_1
GRC04272_1
EX912996.1
BU585497.1
ES742053.1
ES741781.1
GR18728
DA00073
AYC00491_1
BM517285.1
EW741463.1
AS01930
HBC15214_1
EX011289.1
PT00041
Dviv_isotig17312
AS05201
FC821551.1
EX013581.1
ES411914.1
JI180391.1
ES291067.1
ACC22057_1
SRC00043_1
FE916475.1
SR00970
CB043779.1
BE491825.1
FE913862.1
ES409146.1
DN558134.1
CR08732
HSC01583_1
MCC05660_1
ES412088.1
EX009431.1
NBC01507_1
EX013146.1
SC00114
FG355092.1
ES740762.1
DN556673.1
MIC08696_1
CV199036.1
FE916072.1
GR10598
DI00300
MC05101
AE00337
FE912088.1
HG02455
FC821164.1
EX013688.1
HGC06022_1
AS08245
AS11147
PVC00181_1
GR18456
EX012317.1
DAC01688_1
GR11722
TX01787
HC03469
GRC00501_2
EX010443.1
CBC04404_1
BU585490.1
ASC00491_1
ES412081.1
ES413701.1
HBC00644_1
FE918760.1
PPC05913_1
JI179844.1
PP00504
Tcol_isotig00070
MHC07653_1
GR18455
HCC02848_1
ES412747.1
NB07752
JI218022.1
ES411228.1
FC821026.1
NB06479
CSC00260_1
MH00977
DN557221.1
EX014503.1
EX910516.1
MC05115
SS01333
PT00368
PTC00367_1
Hbac_isotig00784
MJ04656
HCC00637_1
PE00051
PPC00808_1
JI168855.1
FC820927.1
HBC14461_1
ALC00106_1
ES411387.1
CR09054
AS14192
LSC00094_1
FE913438.1
ES739030.1
PEC00381_1
EX910879.1
DN557673.1
BMC15464_1
BU586587.1
EX009825.1
EX915382.1
MH09835
Tcir_isotig06264
EX912301.1
ASC17360_1
ES744549.1
ES741604.1
XIC01094_1
AE04767
PPC00808_2
OVC00269_1
WBC02055_1
PTC00112_1
EX011057.1
FC820922.1
SSC01770_1
PTC04044_1
ASC32793_1
GO239992.1
NBC09292_1
DN557180.1
ASC24585_1
PT00730
ES738988.1
Hbac_isotig00783
CR09878
Tcir_isotig09791
GR20092
FD515899.1
FE911370.1
CR02609
ES411671.1
MJC03804_1
PTC01123_1
MIC05258_1
ASC31935_1
SC00251
JO472230.1
ES414113.1
EX013625.1
AS00215
AS02511
FE910218.1
ALC00738_1
ES410808.1
PTC03448_1
DAC01592_1
FC821647.1
FE919488.1
MI02122
BMC03219_1
FE912206.1
FC817403.1
HC03539
FG619787.1
MI08999
DIC01533_1
CK850783.1
PT03676
AS01899
MP00042
FE909369.1
RSC02448_1
ES739796.1
EX914476.1
JI228771.1
GR979058.1
FE914054.1
GR977157.1
GR978505.1
AS01167
BXC00536_1
AA293939.1
CR09397
CR12472
AYC01271_1
EX012831.1
GR978196.1
CJC00157_1
ASC00491_3
AS03095
BU666015.1
EX008445.1
RS10537
OOC03313_1
CB043705.1
Dviv_isotig17311
GR10083
TSC00831_1
CB043081.1
TS00887
GO249883.1
JI471072.1
Name_isotig04979
HC02559
ACC15410_1
CR11193
TCC02129_1
NBC02987_1
EX008340.1
ASC22579_1
GR20091
CJC00275_1
Acan_isotig01986
HC02262
AE01333
ASC09938_1
HC04404
FG589681.1
EX567057.1
Oden_isotig16931
AS08361
FE910440.1
AS14181
ACC01727_1
EX013050.1
ES408756.1
EX008988.1
NAC00776_1
FE911397.1
CRC00110_1
HS01541
ASC00491_2
PT01065
CJC08498_1
ES409753.1
FE910193.1
ES411460.1
GO249795.1
AS02247
MPC00730_1
MHC03105_1
GR18729
Name_isotig04489
CR06178
GR19365
FC821445.1
TDC00041_1
MCC05526_1
XI00948
EX011235.1
ES740196.1
NBC07254_1
JI177993.1
JI472222.1
DA04459
FC820796.1
Associated_featureWBsf644157
WBsf644158
WBsf987791
WBsf221223
Experimental_infoRNAi_result (18)
Expr_patternExpr1027148
Expr1032238
Expr1145343
Expr2015451
Expr2033686
Drives_constructWBCnstr00035488
Construct_productWBCnstr00035488
WBCnstr00041962
Microarray_results (32)
Expression_cluster (193)
Interaction (210)
Map_infoMapIIPosition-2.57978Error0.003415
PositivePositive_cloneC27A2Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4269
Pseudo_map_position
ReferenceWBPaper00025088
WBPaper00031865
WBPaper00038491
WBPaper00049828
WBPaper00053133
WBPaper00055090
WBPaper00061110
WBPaper00065269
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene