WormBase Tree Display for Gene: WBGene00004429

WBGene00004429 SMap: S_parent: Sequence: Y48G8AL
  Identity: Version: 1
    Name: CGC_name: rpl-17
      Sequence_name: Y48G8AL.8
      Molecular_name: Y48G8AL.8
        Y48G8AL.8.1
        CE22195
      Other_name: CELE_Y48G8AL.8 Accession_evidence: NDB BX284601
      Public_name: rpl-17
    DB_info: Database: AceView gene 1B631
        WormQTL gene WBGene00004429
        WormFlux gene WBGene00004429
        NDB locus_tag CELE_Y48G8AL.8
        Panther gene CAEEL|WormBase=WBGene00004429|UniProtKB=Q9BL19
          family PTHR11593
        NCBI gene 171692
        RefSeq protein NM_170799.7
        SwissProt UniProtAcc Q9BL19
        UniProt_GCRP UniProtAcc Q9BL19
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpl
    Allele (20)
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rpl17 using blastP
    RNASeq_FPKM (74)
    GO_annotation: 00091792
      00091793
      00091794
      00091795
      00091796
      00112850
      00112851
      00112852
      00112853
    Contained_in_operon: CEOP1016
    Ortholog (40)
    Structured_description: Concise_description: rpl-17 encodes a large ribosomal subunit L17 protein; by homology, RPL-17 is predicted to function in protein biosynthesis; in C. elegans, RPL-17 activity is required for embryonic and germline development, as well as normal postembryonic growth rates. Paper_evidence: WBPaper00005654
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPL17 (ribosomal protein L17). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y48G8AL.8
    Corresponding_CDS_history: Y48G8AL.8b:wp253
    Corresponding_transcript: Y48G8AL.8.1
    Other_sequence: CBC15159_1
      FE912696.1
      HC00646
      TCC02305_1
      EX911641.1
      BU585419.1
      CD374685.1
      ALC00055_1
      GR19004
      AYC00138_2
      AS00327
      XI01032
      CK850635.1
      DN557517.1
      MCC04619_1
      ES744264.1
      EX913564.1
      CD203401.1
      BE132541.1
      BU666467.1
      FE919266.1
      HG12147
      FE917033.1
      JI215522.1
      BMC04561_1
      AS16365
      FC821875.1
      FE920153.1
      MHC03195_1
      ES410052.1
      ES744380.1
      ES742548.1
      ASC00431_4
      RS07383
      AE04214
      NBC09438_1
      EX913302.1
      DA02490
      FE919018.1
      MC04097
      CBC00512_1
      MC04471
      MC02200
      MJC00302_1
      EX913531.1
      AS16164
      AS16339
      CBC02781_1
      DN556816.1
      FE911712.1
      CBC16954_1
      CR11919
      MC00658
      TM01990
      EX916687.1
      XIC02182_1
      CRC00538_1
      PT00027
      PP00599
      MC03776
      SR00794
      EX009826.1
      CK855126.1
      MC03697
      EX910785.1
      ES740183.1
      AW874873.1
      MC01294
      DIC01860_1
      FE916606.1
      MC02017
      GRC04006_1
      Name_isotig01675
      GW405997.1
      EX015076.1
      GR17465
      FE908444.1
      CR09455
      HC03400
      RSC00536_1
      WBC01043_1
      NBC09592_1
      MC04995
      JO472805.1
      Dviv_isotig18993
      ES739943.1
      CR10113
      AS15836
      MC04019
      BU666695.1
      MC01992
      AS15804
      EL784649.1
      MCC03859_1
      GR18305
      EX914548.1
      AS02981
      MC04306
      CBC08925_1
      JO472554.1
      EX911424.1
      AI110572.1
      MI08930
      HC03473
      JI177434.1
      MJ01237
      GRC04379_1
      MC03682
      FE906633.1
      MCC00030_1
      FG580805.1
      ES744614.1
      FE919038.1
      EX913549.1
      MC04446
      Oden_isotig17791
      AS16132
      MI03410
      NB07407
      FC821960.1
      BU666728.1
      GO479265.1
      MC02185
      CK850063.1
      MC02046
      BMC12309_1
      CJC00083_1
      FC821146.1
      ES411238.1
      CJC18427_1
      GP00299
      HC02202
      BMC12308_1
      AS00224
      ES413858.1
      MC01348
      EX915880.1
      MC02102
      BU089279.1
      GR11963
      CJC09484_1
      GR17951
      GRC00322_2
      PPC15878_1
      AYC00138_3
      XIC00622_1
      NB08798
      ASC00320_1
      EX916430.1
      AS16222
      BMC00460_1
      MC01771
      SRC00024_1
      CBC15485_1
      GR14473
      GR14462
      FC821758.1
      EX009521.1
      CGC01372_1
      ZP00058
      EX009949.1
      EX916087.1
      GR19005
      DAC00461_1
      HGC06155_1
      ES739443.1
      TV01289
      AS15984
      EX910813.1
      AS17769
      JI472133.1
      MC01473
      HGC00556_1
      GR17272
      Tcir_isotig07516
      ES740741.1
      Tcir_isotig11462
      AS06786
      DA02216
      JI182756.1
      BXC00798_1
      TX00264
      GR18042
      MC04295
      GRC00322_1
      ASC01742_1
      ES741384.1
      MC03870
      ES412341.1
      EX912520.1
      MC01678
      AE01339
      GO250142.1
      AS16352
      EX914956.1
      GPC02435_1
      BUC02154_1
      GR17950
      DA05811
      EX558170.1
      AI313847.1
      SSC04263_1
      DAC00080_1
      FC821345.1
      BM517272.1
      MH02079
      BE239156.1
      EX915048.1
      ASC38766_1
      GR18558
      FE914846.1
      CD455036.1
      GR17466
      HG05908
      GO239860.1
      ES742521.1
      NB07597
      FE919924.1
      MC02209
      GW409506.1
      GR12683
      MC02058
      DA02739
      AE04111
      MIC02439_1
      Hbac_isotig04414
      EX014638.1
      GR19214
      CD455508.1
      CB035472.1
      MCC00451
      HG03414
      ES410046.1
      MC01656
      BU086835.1
      BU089219.1
      GR19962
      BUC01096_1
      CJC08363_1
      MC04459
      AI374014.1
      NB06573
      MC03980
      MC02217
      AE00988
      GR17271
      GRC00322_3
      HCC00547_1
      TMC01738_1
      FG353498.1
      ES741170.1
      MC02161
      FC821409.1
      GR977957.1
      MC04460
      EX911250.1
      MC00431
      MC01890
      DN557157.1
      MC03756
      CSC00492_1
      FE913836.1
      HBC00024_1
      AYC00138_1
      ES742926.1
      CJC10889_1
      CK725768.1
      FC820787.1
      NB07665
      HC04794
      MAC01337_1
      CBC09436_1
      WBC00568_1
      CD455730.1
      CR02795
      FE917031.1
      EX012347.1
      SC00096
      ES561210.1
      GR19961
      MC01670
      GR11006
      HG10286
      MC04215
      GR17485
      Tcir_isotig16157
      GR19215
      BU087989.1
      CD455027.1
      MC01821
      GR14408
      CJC16948_1
      EX008004.1
      GR17915
      Oden_isotig17792
      MI08932
      PT00740
      XIC02694_1
      NB06425
      CD203271.1
      TDC02138_1
      EX014272.1
      OOC03157_1
      FD514878.1
      MC03831
      MC03799
      AS01366
      MC02198
      EX911959.1
      Name_isotig09132
      DA02217
      NAC01058_1
      AS17657
      GR14463
      CK854787.1
      GRC03463_1
      MC02114
      ES744479.1
      GO248903.1
      FC821261.1
      MC03923
      AW208324.1
      CJC10155_1
      Tcir_isotig16900
      SSC02681_1
      GR17484
      CD374695.1
      MI08362
      MA02007
      ES741803.1
      GO249797.1
      NBC00117_2
      MC01957
      BU087706.1
      MC03746
      EX011039.1
      CR11375
      MC02218
      MC04025
      DI02276
      CBC02152_1
      XI03231
      CRC11681_1
      AS02787
      ES742535.1
      EG025689.1
      BU088944.1
      MC01418
      FD515175.1
      EX012474.1
      FE917653.1
      AS16051
      TSC07152_1
      CD455026.1
      GR977344.1
      GR18974
      MC02021
      OVC00463_1
      HC03516
      ES561207.1
      EX556694.1
      ZPC00148_1
      JI479340.1
      MC04469
      HG10767
      LSC00211_1
      FE909071.1
      CR06876
      MC04355
      FE919265.1
      EX915114.1
      Tcol_isotig22291
      ASC00431_3
      MI05488
      MI06186
      ACC01929_1
      GR17916
      AS17155
      ES741665.1
      FC821434.1
      AS17770
      CD374791.1
      XI04129
      MC00640
      PSC00264_2
      HG09803
      GR19669
      PPC00172_1
      MC04445
      EX910023.1
      EX910189.1
      NBC00117_1
      GR18975
      AS15926
      CD455592.1
      FC822019.1
      MIC08806_1
      SS01318
      ES408972.1
      PTC00018_1
      MAC01349_1
      PTC03410_1
      CJC14291_1
      MC02005
      FG619338.1
      Dviv_isotig18994
      HBC07368_1
      GR18306
      MC03690
      AM744267.1
      MC01475
      MC02013
      HG09991
      NB08531
      CJC00363_1
      HBC13517_1
      EX007759.1
      Acan_isotig07114
    Associated_feature: WBsf643044
      WBsf655890
      WBsf980939
      WBsf217190
      WBsf217191
  Experimental_info: RNAi_result (23)
    Expr_pattern (11)
    Drives_construct: WBCnstr00003552
      WBCnstr00009755
      WBCnstr00009756
      WBCnstr00035493
    Construct_product: WBCnstr00035493
    Antibody: WBAntibody00002468
    Microarray_results (33)
    Expression_cluster (176)
    Interaction (304)
  Map_info: Map: I Position: -16.9301 Error: 0.002606
    Positive: Positive_clone: Y48G8AL Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025088
    WBPaper00028984
    WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00064023
    WBPaper00064339
    WBPaper00064934
    WBPaper00065861
  Remark (2)
  Method: Gene