WormBase Tree Display for Gene: WBGene00003564

WBGene00003564 SMap: S_parent: Sequence: F10G8
  Identity: Version: 1
    Name: CGC_name: ncs-2
      Sequence_name: F10G8.5
      Molecular_name: F10G8.5
        F10G8.5.1
        CE09340
      Other_name: CELE_F10G8.5 Accession_evidence: NDB BX284601
      Public_name: ncs-2
    DB_info: Database: AceView gene 1K610
        WormQTL gene WBGene00003564
        WormFlux gene WBGene00003564
        NDB locus_tag CELE_F10G8.5
        Panther gene CAEEL|WormBase=WBGene00003564|UniProtKB=P36609
          family PTHR23055
        NCBI gene 172866
        RefSeq protein NM_001381187.1
        SwissProt UniProtAcc P36609
        UniProt_GCRP UniProtAcc P36609
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ncs
    Allele (22)
    Strain: WBStrain00050660
    RNASeq_FPKM (74)
    GO_annotation: 00044971
      00044972
      00111141
    Ortholog (50)
    Paralog: WBGene00003563 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008998 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021116 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008307 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015867 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003565 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007710 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Expressed in GABAergic neurons; cholinergic neurons; motor neurons; nervous system; and ventral nerve cord. Is an ortholog of human RCVRN (recoverin). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F10G8.5
    Corresponding_transcript: F10G8.5.1
    Other_sequence: L33681
      Tcir_isotig13372
      AI511505.1
      AS02841
      EG025696.1
      JI238388.1
      FE916343.1
      HBC00997_1
      AA618701.1
      PP01733
      EY461026.1
      AS09776
      AY758207.1
      Acan_isotig07912
      Oden_isotig17714
      FC550648.1
      Tcol_isotig15116
      AS01737
      JI462963.1
      MIC05754_1
      ES740514.1
      JO468903.1
      JI225823.1
      TCC01405_1
      TS01647
      FD515297.1
      PPC03509_1
      Tcir_isotig21575
      JI177173.1
      XIC03556_1
      EY459585.1
      ALC00710_1
      ACC01987_1
      FE911401.1
      JI236054.1
      TSC00362_1
      CRC03170_1
      ASC07233_1
      CSC00279_1
      BU586529.1
      JO467978.1
      TS00833
      CR09369
      EY466403.1
      PPC02591_1
      SC01174
      MI07913
      JI225798.1
      CBC05527_1
      JI231650.1
      CJC03452_1
      Dviv_isotig23575
      ES742631.1
      JI215142.1
      BQ381265.1
      MI06042
      TX01661
      XI02822
      ASC02255_1
      FC543599.1
      FC550509.1
      ASC39312_1
      MP01443
      EX007480.1
      CJC06553_1
      EY462537.1
      OVC01405_1
      JI215182.1
      JI219014.1
      FE913638.1
      AS02840
      JI211866.1
      BXC01132_1
      TX00377
      GR979233.1
      EX007258.1
      TCC02192_1
      CR02027
      MPC00448_1
    Associated_feature: WBsf664820
      WBsf976547
      WBsf976548
      WBsf976549
      WBsf976550
      WBsf220184
      WBsf220185
      WBsf220186
      WBsf220187
  Experimental_info: RNAi_result: WBRNAi00044327 Inferred_automatically: RNAi_primary
      WBRNAi00003359 Inferred_automatically: RNAi_primary
    Expr_pattern (8)
    Drives_construct: WBCnstr00036040
      WBCnstr00042260
    Construct_product: WBCnstr00036040
    Microarray_results (24)
    Expression_cluster (179)
    Interaction (17)
  Map_info: Map: I Position: 4.56168 Error: 0.009448
    Positive: Positive_clone: AC2 Person_evidence: WBPerson1321
          Author_evidence: de Castro E
        C09D5 Person_evidence: WBPerson1321
          Author_evidence: de Castro E
        F10G8 Inferred_automatically: From sequence, transcript, pseudogene data
        K09B7 Person_evidence: WBPerson1321
          Author_evidence: de Castro E
    Mapping_data: Multi_point: 5251
        5541
    Pseudo_map_position
  Reference: WBPaper00004225
    WBPaper00015440
    WBPaper00038491
    WBPaper00051225
    WBPaper00052830
    WBPaper00055090
    WBPaper00061878
    WBPaper00063819
  Remark: [de Castro E, Nef P ] No mutants known. ncs for Neuronal Calcium Sensor. Ce-NCS-2: cDNA: genbank name CELNCS2, accession L33681; Protein: Swiss Prot name NCS2_CAEEL, accession p36609
    I, +4.45
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene