WormBase Tree Display for Gene: WBGene00001620
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WBGene00001620 | SMap | S_parent | Sequence | C12D12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | glt-1 | |||||||
Sequence_name | C12D12.2 | ||||||||
Molecular_name | C12D12.2a | ||||||||
C12D12.2a.1 | |||||||||
CE29083 | |||||||||
C12D12.2b | |||||||||
CE29084 | |||||||||
C12D12.2b.1 | |||||||||
Other_name | Ceglut-2 | Accession_evidence | EMBL | D86740 | |||||
CeGlt-2 | Accession_evidence | EMBL | U35250 | ||||||
CeGlt-1 | CGC_data_submission | ||||||||
glt-2 | CGC_data_submission | ||||||||
CELE_C12D12.2 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | glt-1 | ||||||||
DB_info | Database | AceView | gene | XE117 | |||||
WormQTL | gene | WBGene00001620 | |||||||
WormFlux | gene | WBGene00001620 | |||||||
NDB | locus_tag | CELE_C12D12.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001620|UniProtKB=Q10901 | |||||||
family | PTHR11958 | ||||||||
NCBI | gene | 180641 | |||||||
RefSeq | protein | NM_001029223.6 | |||||||
NM_001029222.4 | |||||||||
SwissProt | UniProtAcc | Q10901 | |||||||
UniProt_GCRP | UniProtAcc | Q10901 | |||||||
OMIM | gene | 600300 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | glt | ||||||||
Allele (42) | |||||||||
Strain | WBStrain00040793 | ||||||||
WBStrain00047426 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Ortholog (38) | |||||||||
Paralog | WBGene00001621 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001625 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001624 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00001623 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00001622 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | glt-1 encodes a predicted plasma membrane glutamate transporter that is functional when expressed in Xenopus oocytes; expressed in the M3 pharyngeal neuron, the male tail, some anterior hypodermal cells, and in cells in the terminal bulb of the pharynx. | Paper_evidence | WBPaper00002546 | |||||
WBPaper00002806 | |||||||||
WBPaper00003537 | |||||||||
WBPaper00004458 | |||||||||
WBPaper00010915 | |||||||||
Curator_confirmed | WBPerson48 | ||||||||
Date_last_updated | 25 Apr 2005 00:00:00 | ||||||||
Automated_description | Enables L-glutamate transmembrane transporter activity. Predicted to be involved in L-glutamate transmembrane transport. Located in cell projection. Expressed in body wall musculature; cephalic sheath cell; hypodermis; and muscle cell. Human ortholog(s) of this gene implicated in Huntington's disease; amyotrophic lateral sclerosis; and developmental and epileptic encephalopathy 41. Is an ortholog of human SLC1A2 (solute carrier family 1 member 2). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:332 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10940) | ||||
DOID:12858 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10940) | ||||||
DOID:0080442 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10940) | ||||||
Molecular_info | Corresponding_CDS | C12D12.2a | |||||||
C12D12.2b | |||||||||
Corresponding_transcript | C12D12.2a.1 | ||||||||
C12D12.2b.1 | |||||||||
Other_sequence | JO472791.1 | ||||||||
BXC06766_1 | |||||||||
FK804903.1 | |||||||||
ACC01095_1 | |||||||||
MI00354 | |||||||||
Dviv_isotig17686 | |||||||||
U35251.1 | |||||||||
EX557815.1 | |||||||||
FK799884.1 | |||||||||
Hbac_isotig02695 | |||||||||
FC553752.1 | |||||||||
Acan_isotig03816 | |||||||||
Oden_isotig14669 | |||||||||
EX536790.1 | |||||||||
Acan_isotig03815 | |||||||||
ACC18429_1 | |||||||||
FC555724.1 | |||||||||
Dviv_isotig17685 | |||||||||
PPC01007_1 | |||||||||
ACC12343_1 | |||||||||
EX007888.1 | |||||||||
ACC06102_2 | |||||||||
FK808089.1 | |||||||||
FC540198.1 | |||||||||
FC552712.1 | |||||||||
HG09550 | |||||||||
JI170544.1 | |||||||||
FC554474.1 | |||||||||
CR05913 | |||||||||
ACC12797_1 | |||||||||
Hbac_isotig04305 | |||||||||
FC542737.1 | |||||||||
AS14489 | |||||||||
PP02010 | |||||||||
EY458986.1 | |||||||||
CRC02530_1 | |||||||||
FK805085.1 | |||||||||
EX547971.1 | |||||||||
EY461957.1 | |||||||||
Dviv_isotig29299 | |||||||||
JI167030.1 | |||||||||
JO475294.1 | |||||||||
HGC00010_1 | |||||||||
GR13333 | |||||||||
ASC10985_1 | |||||||||
OFC00130_1 | |||||||||
MC01611 | |||||||||
OF00155 | |||||||||
Dviv_isotig29567 | |||||||||
JI167144.1 | |||||||||
Name_isotig02068 | |||||||||
ACC06102_1 | |||||||||
Dviv_isotig29918 | |||||||||
GRC02505_1 | |||||||||
Acan_isotig20688 | |||||||||
EX562628.1 | |||||||||
MCC00277_1 | |||||||||
EY460044.1 | |||||||||
SR02094 | |||||||||
Name_isotig08522 | |||||||||
HBC07480_1 | |||||||||
SRC02909_1 | |||||||||
FC546947.1 | |||||||||
CJC10309_1 | |||||||||
EX007866.1 | |||||||||
EY473183.1 | |||||||||
EX550158.1 | |||||||||
FC552110.1 | |||||||||
MIC01767_1 | |||||||||
Associated_feature | WBsf718546 | ||||||||
WBsf1004642 | |||||||||
WBsf1004643 | |||||||||
WBsf235489 | |||||||||
Experimental_info | RNAi_result | WBRNAi00010636 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027701 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00040376 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr4787 | ||||||||
Expr14560 | |||||||||
Expr1012956 | |||||||||
Expr1030972 | |||||||||
Expr1144438 | |||||||||
Expr2012126 | |||||||||
Expr2030362 | |||||||||
Drives_construct (4) | |||||||||
Construct_product | WBCnstr00012244 | ||||||||
WBCnstr00036819 | |||||||||
Antibody | WBAntibody00001533 | ||||||||
WBAntibody00001534 | |||||||||
WBAntibody00002630 | |||||||||
Microarray_results (26) | |||||||||
Expression_cluster (191) | |||||||||
Interaction (15) | |||||||||
Map_info | Map | X | Position | -10.2673 | Error | 0.012682 | |||
Positive | Positive_clone | B0015 | |||||||
C12D12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 4357 | |||||||
4758 | |||||||||
Reference (14) | |||||||||
Remark (2) | |||||||||
Method | Gene |