WormBase Tree Display for Gene: WBGene00020109
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WBGene00020109 | SMap | S_parent | Sequence | R151 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | der-2 | Person_evidence | WBPerson2876 | |||||
Sequence_name | R151.6 | ||||||||
Molecular_name | R151.6 | ||||||||
R151.6.1 | |||||||||
CE39620 | |||||||||
Other_name | CELE_R151.6 | Accession_evidence | NDB | BX284603 | |||||
Public_name | der-2 | ||||||||
DB_info | Database | AceView | gene | 3I312 | |||||
WormQTL | gene | WBGene00020109 | |||||||
WormFlux | gene | WBGene00020109 | |||||||
NDB | locus_tag | CELE_R151.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020109|UniProtKB=Q21997 | |||||||
family | PTHR11009 | ||||||||
NCBI | gene | 176018 | |||||||
RefSeq | protein | NM_001392140.1 | |||||||
SwissProt | UniProtAcc | Q21997 | |||||||
TREEFAM | TREEFAM_ID | TF314715 | |||||||
UniProt_GCRP | UniProtAcc | Q21997 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 02 Mar 2020 15:25:00 | WBPerson1983 | Name_change | CGC_name | der-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | der | ||||||||
Allele (23) | |||||||||
Strain | WBStrain00052444 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (19) | |||||||||
Contained_in_operon | CEOP3424 | ||||||||
Ortholog (40) | |||||||||
Paralog | WBGene00000843 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable misfolded protein binding activity; signal recognition particle binding activity; and ubiquitin-specific protease binding activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of Hrd1p ubiquitin ligase ERAD-L complex. Is an ortholog of human DERL2 (derlin 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R151.6 | |||||||
Corresponding_CDS_history | R151.6:wp153 | ||||||||
Corresponding_transcript | R151.6.1 | ||||||||
Other_sequence | JI476314.1 | ||||||||
CJC02475_1 | |||||||||
TM01593 | |||||||||
HBC15475_1 | |||||||||
EX541124.1 | |||||||||
XIC02029_1 | |||||||||
TMC01286_1 | |||||||||
Oden_isotig21210 | |||||||||
GW407939.1 | |||||||||
XI00575 | |||||||||
CBC13026_1 | |||||||||
CRC05196_1 | |||||||||
ACC09150_1 | |||||||||
EX548202.1 | |||||||||
CR04787 | |||||||||
Dviv_isotig17936 | |||||||||
FK807872.1 | |||||||||
EX536956.1 | |||||||||
EX554372.1 | |||||||||
EY471733.1 | |||||||||
ES410458.1 | |||||||||
JI177268.1 | |||||||||
TVC01504_1 | |||||||||
GO252228.1 | |||||||||
EX562083.1 | |||||||||
TV01616 | |||||||||
FC544596.1 | |||||||||
ACC33471_1 | |||||||||
Acan_isotig11325 | |||||||||
Hbac_isotig03178 | |||||||||
PSC00535_1 | |||||||||
Associated_feature | WBsf226933 | ||||||||
WBsf226934 | |||||||||
Experimental_info | RNAi_result | WBRNAi00080960 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00093389 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00093391 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00108401 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051979 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027891 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00080961 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005512 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00065525 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076619 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00080959 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051978 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00108404 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00080958 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017872 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016417 | ||||||||
Expr1038745 | |||||||||
Expr1155622 | |||||||||
Expr2005658 | |||||||||
Expr2023874 | |||||||||
Drives_construct | WBCnstr00025369 | ||||||||
Construct_product | WBCnstr00025369 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (65) | |||||||||
Interaction (18) | |||||||||
Map_info | Map | III | Position | -0.767964 | |||||
Positive | Positive_clone | R151 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |