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WormBase Tree Display for Gene: WBGene00242888

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Name Class

WBGene00242888SMapS_parentSequenceOVOC_OM2_95
IdentityVersion1
NameSequence_nameOVOC6079
Molecular_nameOVOC6079
OVOC6079.1
OVP10285
Public_nameOVOC6079
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00001014.19221From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
9.82393From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:00001075.5642From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001082.44731From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
42.8611From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
50.5538From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
75.5823From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006641.67439From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
5.28168From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
8.88897From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00256750
00256751
OrthologWBGene00140922Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149383Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157619Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00160028Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00025016Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00027743Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00041750Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00231811Brugia malayiFrom_analysisWormBase-Compara
WBGene00007549Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008033Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008598Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00124578Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00129551Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00179701Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00183321Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217385Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217794Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g1787Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g3596Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g3597Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g8971Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1222Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g1886Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g9609Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g9686Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1018Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g15250Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g21027Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g12071Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g13812Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g14155Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g23035Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g6972Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g873Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11974Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g26735Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g4477Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12461Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g14397Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g8595Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17935Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g4901Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g5965Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1346Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g13735Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g24859Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g27482Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g9107Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g14923Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g18106Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g2353Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00110.g4579Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00188.g6585Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_08420.g21496Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-spin-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cni-spin-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cni-spin-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold587.g4911Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g10147Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g10367Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00041.g2191Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00567.g12966Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00954.g17052Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01936Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_13056Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_19432Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014491Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_018193Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_025389Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07905Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10046Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13761Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14567Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14568Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14713Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40145700Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50134500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50135000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_X0155930Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00052431Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00058769Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00062723Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00092539Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096843Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097308Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097312Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097317Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00097318Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103533Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103648Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105918Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109522Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00110333Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00110468Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111487Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00116134Pristionchus pacificusFrom_analysisWormBase-Compara
chrIV_pilon.g12214Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g15929Caenorhabditis elegansFrom_analysisWormBase-Compara
chrX_pilon.g20353Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00275615Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00282259Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00265266Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00297162Trichuris murisFrom_analysisWormBase-Compara
WBGene00299809Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00245883Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Is an ortholog of C. elegans spin-1; spin-2; and spin-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC6079
Corresponding_transcriptOVOC6079.1
Other_sequence (49)
MethodGene