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WormBase Tree Display for Gene: WBGene00239648

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Name Class

WBGene00239648SMapS_parentSequenceOVOC_OM1b_119
IdentityVersion2
NameSequence_nameOVOC2839
Molecular_nameOVOC2839a
OVOC2839a.1
OVP13179
OVOC2839b
OVP14629
OVOC2839b.1
Public_nameOVOC2839
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
226 Feb 2014 17:23:42WBPerson2062EventAcquires_mergeWBGene00239649
Acquires_mergeWBGene00239649
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000010111.0487From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
2.61617From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:0000104 (15)
WBls:000010717.9303From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010819.8394From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
27.9593From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
29.3491From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
40.2486From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:00006640.655305From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
0.909497From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
1.16369From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00253593
00253594
00253595
00253596
00253597
00253598
OrthologWBGene00157137Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163626Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00036712Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223564Brugia malayiFrom_analysisWormBase-Compara
WBGene00223565Brugia malayiFrom_analysisWormBase-Compara
WBGene00003623Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00130271Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g3152Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10902Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13116Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17576Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16099Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g23788Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4119Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18471Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g27377Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g928Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00201.g6869Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-nhr-25Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18853Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00040.g2145Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00255.g8047Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00025Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_10577Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_007727Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_024912Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_025877Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_025906Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04389Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9501Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0218200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00051197Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066182Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00066922Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00068486Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00085452Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00113242Pristionchus pacificusFrom_analysisWormBase-Compara
chrX_pilon.g20338Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00258090Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00301869Trichuris murisFrom_analysisWormBase-Compara
WBGene00301928Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00241236Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248075Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable nuclear receptor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-25. In C. elegans, nhr-25 is involved in molting cycle and positive regulation of nematode male tail tip morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC2839a
OVOC2839b
Corresponding_CDS_historyOVOC2839:ov242
Corresponding_transcriptOVOC2839a.1
OVOC2839b.1
Other_sequence (23)
ReferenceWBPaper00046529
WBPaper00050764
MethodGene