WormBase Tree Display for Gene: WBGene00239539

WBGene00239539 SMap: S_parent: Sequence: OVOC_OM1b_117
  Identity: Version: 3
    Name: CGC_name: Ovo-acr-8 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC2730
      Molecular_name: OVOC2730
        OVOC2730.1
        OVP13793
      Public_name: Ovo-acr-8
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:33 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:34 WBPerson4055 Name_change: CGC_name: Ovo-acr-8
        3 28 May 2014 09:51:36 WBPerson2062 Event: Acquires_merge: WBGene00239541
      Acquires_merge: WBGene00239541
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: acr
    RNASeq_FPKM: WBls:0000101 15.8052 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
        9.58899 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
      WBls:0000104 (16)
      WBls:0000107 54.432 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 18.8734 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        28.0223 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        43.8054 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        84.5204 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
      WBls:0000664 14.7106 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
        22.9837 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        31.2569 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
    GO_annotation: 00253470
      00253471
      00253472
      00253473
      00253474
      00253475
      00253476
      00253477
    Ortholog: WBGene00139702 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00036931 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00227660 Brugia malayi From_analysis: WormBase-Compara
      WBGene00269182 Brugia malayi From_analysis: WormBase-Compara
      WBGene00000047 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00128161 Caenorhabditis japonica From_analysis: WormBase-Compara
      CBOVI.g3004 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10338 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g3152 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g11936 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g16021 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25172 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4021 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6025 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g19573 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g20287 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00065.g3190 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-acr-8 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13743 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00005.g324 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01328 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023577 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01642 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g20963 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0071520 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00058468 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00092568 Pristionchus pacificus From_analysis: WormBase-Compara
      chrX_pilon.g19900 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00258262 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288522 Trichuris muris From_analysis: WormBase-Compara
      WBGene00289340 Trichuris muris From_analysis: WormBase-Compara
      WBGene00297196 Trichuris muris From_analysis: WormBase-Compara
    Paralog (46)
    Structured_description: Automated_description: Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans acr-8. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC2730
    Corresponding_CDS_history: OVOC2730:ov243
    Corresponding_transcript: OVOC2730.1
    Other_sequence (24)
  Method: Gene