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WormBase Tree Display for Gene: WBGene00238322

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Name Class

WBGene00238322SMapS_parentSequenceOVOC_OM1b_61
IdentityVersion2
NameCGC_nameOvo-pop-1From_analysisInferred_from_orthology
Sequence_nameOVOC1513
Molecular_name (12)
Public_nameOvo-pop-1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:32WBPerson4055Name_changeCGC_nameOvo-pop-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpop
RNASeq_FPKMWBls:000010113.7617From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
16.112From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104 (16)
WBls:000010725.9215From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010820.9552From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
30.327From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
32.5791From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
37.4468From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
WBls:000066416.5463From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
20.8718From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
25.1973From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00252216
OrthologWBGene00151887Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190542Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00026953Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032196Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032197Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00032858Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042123Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271704Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226530Brugia malayiFrom_analysisWormBase-Compara
WBGene00004077Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00136597Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00209205Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g9299Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10820Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g17639Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15406Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g23669Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g12618Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g13041Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g15497Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g15521Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g21284Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g12731Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8385Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g23471Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00234.g7568Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g15590Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g15591Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24683Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24684Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24686Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g24833Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold627.g6870Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01605.g22017Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_20143Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_000853Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11749Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g1100Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g1689Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g21938Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10144300Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00057145Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00099291Pristionchus pacificusFrom_analysisWormBase-Compara
chrI_pilon.g403Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00278626Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00261036Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287299Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in Wnt signaling pathway. Is an ortholog of C. elegans pop-1. In C. elegans, pop-1 is involved in several processes, including mesodermal cell fate commitment; regulation of cell division; and regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC1513a
OVOC1513b
OVOC1513c
OVOC1513d
Corresponding_CDS_historyOVOC1513:ov245
Corresponding_transcriptOVOC1513a.1
OVOC1513b.1
OVOC1513c.1
OVOC1513d.1
Other_sequence (33)
MethodGene