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WormBase Tree Display for Gene: WBGene00194107

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Name Class

WBGene00194107SMapS_parentSequenceCbre_Contig96
IdentityVersion6
NameCGC_nameCbn-lron-13From_analysisInferred_from_orthology
Sequence_nameCBN32142
Molecular_nameCBN32142
CBN32142.1
CN33937
Public_nameCbn-lron-13
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:53WBPerson1847EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbn-lron-13
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:23WBPerson1983Name_changeCGC_nameCbn-lron-13
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameCbn-lron-13
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlron
RNASeq_FPKMWBls:00000020.23742From_analysisRNASeq.brenneri.WBls:0000002.control_mean
0.386981From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
0.541318From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
0.67422From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
0.771681From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
RNASeq.brenneri.WBls:0000002.control_median
WBls:00000040.475318From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.950637From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000241.53668From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
1.59246From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
3.33714From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
3.45872From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
4.24878From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:00000380.187422From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
0.374844From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (12)
WBls:00001010.287802From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
0From_analysisRNASeq.brenneri.total_over_all_stages.control_median
OrthologWBGene00061516Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g4465Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9360Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g324Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13767Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16344Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20899Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2168Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6390Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3995Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19036Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-lron-13Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_02876.g28222Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19794Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_19795Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008744Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_008751Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_008763Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_008773Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08403Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_30036900Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00013574Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00035613Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00061538Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00061539Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00134711Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00222309Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g9379Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00236990Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00278617Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00262855Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293986Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00139456Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00157807Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159182Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190475Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191354Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191455Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193408Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs an ortholog of C. elegans lron-13.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN32142
Corresponding_transcriptCBN32142.1
Experimental_infoMicroarray_resultsGPL14142_CBN32142_402-461_0.885_27_C
GPL14142_CBN32142_774-833_0.924_11_B
GPL14142_CBN32142_865-924_0.893_23_A
Remark[190208 pad] The CGC name Cbn-lron-13 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cbn-lron-13 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene