WormBase Tree Display for Gene: WBGene00161262

WBGene00161262 SMap: S_parent: Sequence: Cbre_Contig684
  Identity: Version: 2
    Name: CGC_name: Cbn-col-140.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN22537
      Molecular_name: CBN22537
        CBN22537.1
        CN16450
      Public_name: Cbn-col-140.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-col-140.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
            RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
            RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0.130333 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        0.21147 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        0.235078 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
            RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
            RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 1.59913 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        1.65481 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        1.7105 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 499.039 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        574.786 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00220476
    Ortholog: WBGene00000713 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00030914 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00058864 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00090321 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00090372 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00092011 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00092285 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00092286 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00095326 Pristionchus pacificus From_analysis: OMA
      WBGene00098057 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00100342 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00111475 Pristionchus pacificus From_analysis: OMA
      WBGene00130631 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00137640 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CSP26.g902 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21327 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21533 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24956 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16180 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g29942 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24577 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_04044.g18568 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-col-140 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold536.g3281 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01151.g18791 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_017818 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g5584 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50201800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00228353 Brugia malayi From_analysis: WormBase-Compara
      chrV_pilon.g14323 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237999 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00288383 Trichuris muris From_analysis: WormBase-Compara
    Paralog (194)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-140. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN22537
    Corresponding_transcript: CBN22537.1
    Other_sequence (105)
  Method: Gene