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WormBase Tree Display for Gene: WBGene00143502

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Name Class

WBGene00143502SMapS_parentSequenceCbre_Contig42
IdentityVersion1
NameSequence_nameCBN04777
Molecular_nameCBN04777
CBN04777.1
CN26900
Public_nameCBN04777
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020From_analysis (12)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240.148808From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:00000380.114409From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
0.228819From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:00000410.017307From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
0.034915From_analysisRNASeq.brenneri.WBls:0000041.control_mean
0.072091From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
0.108819From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
0.111161From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
0.249268From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
0From_analysis (12)
WBls:00001010.025402From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
0From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00206057
OrthologWBGene00003577Caenorhabditis elegansFrom_analysisTreeFam
WBGene00003813Caenorhabditis elegansFrom_analysisTreeFam
WBGene00011768Caenorhabditis elegansFrom_analysisTreeFam
WBGene00016753Caenorhabditis elegansFrom_analysisTreeFam
WBGene00029418Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00053285Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00053752Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00061773Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064315Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00065317Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00090143Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00113020Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00123573Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00124408Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00127789Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00128423Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00133965Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00133999Caenorhabditis japonicaFrom_analysisTreeFam
CBOVI.g183Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g184Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g2284Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3765Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20280Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g4279Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g4280Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g4281Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g8034Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g13062Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g13063Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6865Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g6866Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10079Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g23551Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23552Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g24534Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g24535Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g9929Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10981Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00107.g4503Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00258.g8012Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_01173.g15887Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_X.g26245Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_02082.g24757Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01542Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025790Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00217074Caenorhabditis japonicaFrom_analysisWormBase-Compara
Paralog (31)
Structured_descriptionAutomated_descriptionPredicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Is an ortholog of C. elegans nrf-6 and ndg-4 and members of the C. elegans oac gene class including oac-46.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN04777
Corresponding_CDS_historyCBN04777:np197
Corresponding_transcriptCBN04777.1
Other_sequenceNBC05730_1
CRC08220_1
Dviv_isotig20020
FC539041.1
NB11677
EY469797.1
Oden_isotig21693
Oden_isotig18508
Experimental_infoMicroarray_resultsGPL14142_CBN04777_763-822_0.835_67_A
GPL14142_CBN04777_1001-1060_0.868_40_C
GPL14142_CBN04777_1782-1841_0.913_15_B
MethodGene