WormBase Tree Display for Gene: WBGene00135716

WBGene00135716 SMap: S_parent: Sequence: Cjap.Contig16421
  Identity: Version: 2
    Name: CGC_name: Cjp-tyr-4 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16512
      Molecular_name: CJA16512
        CJA16512.1
        JA45531
      Public_name: Cjp-tyr-4
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-tyr-4
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tyr
    RNASeq_FPKM: WBls:0000004 12.4615 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 59.2795 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 81.4266 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        81.9003 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        82.3739 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 34.9919 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        40.0564 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        48.5602 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        49.7012 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        55.2388 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        56.4062 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        63.1113 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        65.7126 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        68.4812 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        71.2958 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 52.1117 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        59.2795 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00199811
    Ortholog: WBGene00016419 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
      WBGene00026773 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00066580 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
      WBGene00115223 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00163861 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
      WBGene00191899 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00223744 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g12229 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6402 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP28.g3760 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g11145 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g1406 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8096 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g79 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g15575 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cang_2012_03_13_00147.g5586 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_09192.g21934 Caenorhabditis angaria From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13146 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g22413 Panagrellus redivivus From_analysis: WormBase-Compara
      WBGene00107503 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00237944 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00259546 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00259957 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287143 Trichuris muris From_analysis: WormBase-Compara
    Paralog (11)
    Structured_description: Automated_description: Predicted to enable oxidoreductase activity. Is an ortholog of C. elegans tyr-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16512
    Corresponding_transcript: CJA16512.1
    Other_sequence (47)
  Method: Gene